SECUENCIA Y ARBOL FILOGENETICO SIN EL PAN PANISCUS NI EL

NEANDERTHAL:
>Caucasico_1_np_16024-16365

TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATCTCGTACATTACTGCCAGCCACCATG
AATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCTTACAAGCAAGTACAG
CAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCACCCCTCACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGCACAT
AGTACATAAAGCCATTTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC

>Caucasico_8_np_16024-16365

TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTACATTACTGCCAGCCACCATG
AATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAAAAACCCAACCCACATCAAAACCCCCTCCCCATGCTTACAAGCAAGTACAG
CAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCACCCCTCACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACAT
AGCACATAAAGCCATTTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC

>Caucasico_14_np_16024-16365

TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATCTCGTACATTACTGCCAGCCACCATG
AATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAAAAACCCAACCCACATCAAAACCCCCTCCCCATGCTTACAAGCAAGTACAG
CAATCAACCCCCAACTATCACACATCAACTGCAACTCCAAAGCCACCCCTCACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACAT
AGCACATAAAGCCATTTACCGTACATAGCACATTACAGTCAAATCTCTTCTCGTCCC

>Caucasico_47_np_16024-16365

TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTACTTCGTACATTACTGCCAGCCACCATG
AATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCTTCCCCATGCTTACAAGCAAGTACAG
CAATCAACCTTCAACTATCACACATCAACTGCAACTCCAAAGCCACCCCTCACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACAT
AGTACATAAAGCCATTTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGCCCC

>Caucasico_62_np_16024-16365

TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTTACCCATCAACAACCGCTATGTATTTCGTACATTACTGCCAGCCACCATG
AATATTGCACGGTACCATAAATACTTGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCTTACAAGCAAGTACAG
CAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCACCTCTCACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACAT
AGTACATAAAGCCATTTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC

>Caucasico_75_np_16024-16365

TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTACATTACTGCCAGCCACCATG
AATATTGTACGGTACCATAAATACTTGACCACCTATAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCTTACAAGCAAGTACAG
CAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCACCCCTCACCCACTAGGATACCAACAAACCTACCCACCCTCAACAGTACAT
AGTACATAAAGCCATTTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC

>Ancient_Siberian_np_16024-16365

TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTACATTACTGCCAGCCACCATG
AATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCTTACAAGCAAGTACAG
CAATCAACCTTCAACTATCACACATCAACTGCAACTCCAAAGCCACCCCTCACCCACTAGGATACCAACAAACCTACCCACCCTCAACAGTACAT
AGTACATAAAGCCATTTATCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC

>Mongol_216223_np_16024-16365

TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTACATTACTGCCAGCCACCATG
AATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCTTACAAGCAAGTACAG
CAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCACCCCTCACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACAT
AGCACATAAAGCCATTTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGCCCC

>Mongol_316051_np_16024-16365

TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATCTCGTACATTACTGCCAGCCACCATG
AATATTGTACCGTACCATAAATACTTGACCACCTGTAGTACATAAAAACCCAATCCACATCAACCCCCCCCCCCCATGCTTACAAGCAAGTACAG
CAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCACCCCTCACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACAT
AGTACATAAAGCCATTTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGCCCC

>Mongol_416223_np_16024-16365

TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTACATTACTGCCAGCCACCATG
AATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCTTACAAGCAAGTACAG
CAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCACCCCTCACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACAT
AGTACATAAAGCCATTTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGCCCC
Observaciones:
1. El Ancient Siberian y el Caucásico 75 comparten un origen monofilético, pero también parafilético
comparado con el Caucásico 1 y el Caucásico 62
2. El Caucásico 1 y el Caucásico 63 comparten un origen monofilético respectivamente
3. El Mongol 316051 tiene un origen monofilético
4. El Mongol 416223 tiene un origen Polifilético, ya que no se sabe a cuál línea pertenece
5. El Caucásico 47 es parafilético comparado con los individuos de 1, 2 y 3
6. El Mongol 216223 es parafilético comparado con el Caucásico 14 y el Caucásico 8.

SECUENCIA Y ARBOL FILOGENETICO CON EL NEANDERTHAL:

>Neanderthal_np_ 16024-16365

TCATGGGGGAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAGCAACCGCTATGTATTTCGTACATTACTGCCAGCCACCA
GAATATTGTACAGTACCATAATTACTTGACTACCTGCAGTACATAAAAACCTAATCCACATCAACCCCCCCCCCCCATGCTTACAAGCA
GCACAGCAATCAACCTTCAACTGTCATACATCAACTACAACTCCAAAGACGCCCTTACACCCACTAGGATATCAACAAACCTACCCACC
TTGACAGTACATAGCACATAAAGTCATTTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGCCCCCATG

Observaciones:
1. El Neanderthal tiene un origen monofilético pero parafilético comparado con los demás individuos
de la grafica
 2. El Mongol 216223 tiene un origen monofilético con el Caucásico 47
3. El Caucásico 8 tiene un origen monofilético, pero parafilético comparado con el Caucásico 75 y el
Ancient Siberian
4. El Caucásico 75 y el Ancient Siberian tienen un origen monofilético pero parafilético comprado con
los demás
5. El Caucásico 62 tiene un origen monofilético
6. El Caucásico 1 y el Caucásico 14 tiene un origen monofilético
7. El Mongol 316051 tiene un origen monofilético pero para parafilético comparado con los demás

SECUENCIA Y ARBOL FILOGENETICO CON EL PAN PANISCUS NI EL

NEANDERTHAL:
>Pan_Paniscus_np_16024-16365

GGAGCGCTCCATGCATTTGGTATTTTCGTCTGGGGGGTATGCACGCGATAGCATTGCGAAACGCTGGCCCCGGAGCACCCTATGTCGAGTATC
TGTCTTTGGTTCCTGCCCCATTACGTTATTTATCGCACCTACGTTCAATATTATTACCTAGCATGATTTACTAAAGCGTGTTAATAATTAATGCTTG
TAGGACATAACAATAACAGCAAAATACCACGTAACTGCTTTCCACACCAACATCATAACAAAAAATTTCCGCCAAACCCCCCTCCCCCACTCCTG
GCTACAGCACTCAAATTCATCTCTGCCAAACCCCAAAAACAAAGAACCCAGATA

Descripción:
 En esta figura podemos observar que todos los individuos comparten un origen monofilético, aunque
puede que ese mismo ancestro en común sea muy lejano.
Secuencias obtenidas en el programa:

1. Alignment result - Caucasico_1     

......16030.....16040.....16050.....16060.....16070....
 
.1608
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
rCRS
CAACC
.......................................................
 
.....
Caucasico_1      TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
  CAACC

0.....16090.....16100.....16110.....16120.....16130....
 
.1614
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCTATGTATTTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
rCRS
ATACT
.........S.............................................
 
.....
Caucasico_1      GCTATGTATCTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
  ATACT

0.....16150.....16160.....16170.....16180.....16190....
 
.1620
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCT
rCRS
TACAA
.......................................................
 
.....
Caucasico_1      TGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCT
  TACAA

0.....16210.....16220.....16230.....16240.....16250....
 
.1626
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCAAGTACAGCAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCA
rCRS
CCCCT
.......................................................
 
.....
Caucasico_1      GCAAGTACAGCAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCA
  CCCCT

0.....16270.....16280.....16290.....16300.....16310....
 
.1632
      ▼         ▼         ▼         ▼         ▼         
 
▼   
CACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAGTACATAAA
rCRS
GCCAT
........................................S..............
 
.....
Caucasico_1      CACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGCACATAGTACATAAA
  GCCAT

  0.....16330.....16340.....16350.....16360.
        ▼         ▼         ▼         ▼     
rCRS TTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC
  ..........................................
Caucasico_1        TTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC

I: Insertion, D: Deletion, V: Transversion, S: Transition, H:

Heteroplasmy

2. Alignment result - Caucasico_8     

 ......16030.....16040.....16050.....16060.....16070....
 
.1608
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
rCRS
CAACC
.......................................................
 
.....
Caucasico_8      TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
  CAACC

0.....16090.....16100.....16110.....16120.....16130....
 
.1614
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCTATGTATTTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
rCRS
ATACT
.......................................................
 
.....
Caucasico_8      GCTATGTATTTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
  ATACT

0.....16150.....16160.....16170.....16180.....16190....
 
.1620
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCT
rCRS
TACAA
............................S..........................
 
.....
Caucasico_8      TGACCACCTGTAGTACATAAAAACCCAACCCACATCAAAACCCCCTCCCCATGCT
  TACAA

0.....16210.....16220.....16230.....16240.....16250....
 
.1626
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCAAGTACAGCAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCA
rCRS
CCCCT
.......................................................
 
.....
Caucasico_8      GCAAGTACAGCAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCA
  CCCCT

0.....16270.....16280.....16290.....16300.....16310....
 
.1632
      ▼         ▼         ▼         ▼         ▼         
 
▼   
 CACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAGTACATAAA
rCRS
GCCAT
...............................................S.......
 
.....
Caucasico_8      CACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAGCACATAAA
  GCCAT

  0.....16330.....16340.....16350.....16360.
        ▼         ▼         ▼         ▼     
rCRS TTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC
  ..........................................
Caucasico_8        TTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC

I: Insertion, D: Deletion, V: Transversion, S: Transition, H:

Heteroplasmy

3. Alignment result - Caucasico_14    

......16030.....16040.....16050.....16060.....16070....
 
.1608
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
rCRS
CAACC
.......................................................
 
.....
Caucasico_14     TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
  CAACC

0.....16090.....16100.....16110.....16120.....16130....
 
.1614
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCTATGTATTTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
rCRS
ATACT
.........S.............................................
 
.....
Caucasico_14     GCTATGTATCTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
  ATACT

0.....16150.....16160.....16170.....16180.....16190....
 
.1620
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCT
rCRS
TACAA
  ............................S..........................
 .....
Caucasico_14     TGACCACCTGTAGTACATAAAAACCCAACCCACATCAAAACCCCCTCCCCATGCT
  TACAA

0.....16210.....16220.....16230.....16240.....16250....
 
.1626
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCAAGTACAGCAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCA
rCRS
CCCCT
....................S..................................
 
.....
Caucasico_14     GCAAGTACAGCAATCAACCCCCAACTATCACACATCAACTGCAACTCCAAAGCCA
  CCCCT

0.....16270.....16280.....16290.....16300.....16310....
 
.1632
      ▼         ▼         ▼         ▼         ▼         
 
▼   
CACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAGTACATAAA
rCRS
GCCAT
...............................................S.......
 
.....
Caucasico_14     CACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAGCACATAAA
  GCCAT

  0.....16330.....16340.....16350.....16360.
        ▼         ▼         ▼         ▼     
rCRS TTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC
  ..............................S...........
Caucasico_14       TTACCGTACATAGCACATTACAGTCAAATCTCTTCTCGTCCC

I: Insertion, D: Deletion, V: Transversion, S: Transition, H:

Heteroplasmy

4. Alignment result - Caucasico_47    

......16030.....16040.....16050.....16060.....16070....
 
.1608
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
rCRS
CAACC
.......................................................
 
.....
Caucasico_47     TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
  CAACC
 0.....16090.....16100.....16110.....16120.....16130....
 
.1614
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCTATGTATTTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
rCRS
ATACT
........S..............................................
 
.....
Caucasico_47     GCTATGTACTTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
  ATACT

0.....16150.....16160.....16170.....16180.....16190....
 
.1620
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCT
rCRS
TACAA
............................................S..........
 
.....
Caucasico_47     TGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCTTCCCCATGCT
  TACAA

0.....16210.....16220.....16230.....16240.....16250....
 
.1626
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCAAGTACAGCAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCA
rCRS
CCCCT
...................S...................................
 
.....
Caucasico_47     GCAAGTACAGCAATCAACCTTCAACTATCACACATCAACTGCAACTCCAAAGCCA
  CCCCT

0.....16270.....16280.....16290.....16300.....16310....
 
.1632
      ▼         ▼         ▼         ▼         ▼         
 
▼   
CACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAGTACATAAA
rCRS
GCCAT
.......................................................
 
.....
Caucasico_47     CACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAGTACATAAA
  GCCAT

  0.....16330.....16340.....16350.....16360.
        ▼         ▼         ▼         ▼     
rCRS TTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC
  ......................................S...
Caucasico_47       TTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGCCCC

I: Insertion, D: Deletion, V: Transversion, S: Transition, H:

Heteroplasmy

5. Alignment result - Caucasico_62    

......16030.....16040.....16050.....16060.....16070....
 
.1608
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
rCRS
CAACC
.............................................S.........
 
.....
Caucasico_62     TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTTACCCATCAA
  CAACC

0.....16090.....16100.....16110.....16120.....16130....
 
.1614
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCTATGTATTTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
rCRS
ATACT
..........................................S............
 
.....
Caucasico_62     GCTATGTATTTCGTACATTACTGCCAGCCACCATGAATATTGCACGGTACCATAA
  ATACT

0.....16150.....16160.....16170.....16180.....16190....
 
.1620
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCT
rCRS
TACAA
.......................................................
 
.....
Caucasico_62     TGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCT
  TACAA

0.....16210.....16220.....16230.....16240.....16250....
 
.1626
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCAAGTACAGCAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCA
rCRS
CCCCT
 .......................................................
 
..S..
Caucasico_62     GCAAGTACAGCAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCA
  CCTCT

0.....16270.....16280.....16290.....16300.....16310....
 
.1632
      ▼         ▼         ▼         ▼         ▼         
 
▼   
CACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAGTACATAAA
rCRS
GCCAT
.......................................................
 
.....
Caucasico_62     CACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAGTACATAAA
  GCCAT

  0.....16330.....16340.....16350.....16360.
        ▼         ▼         ▼         ▼     
rCRS TTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC
  ..........................................
Caucasico_62       TTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC

I: Insertion, D: Deletion, V: Transversion, S: Transition, H:

Heteroplasmy

6. Alignment result - Caucasico_75    

......16030.....16040.....16050.....16060.....16070....
 
.1608
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
rCRS
CAACC
.......................................................
 
.....
Caucasico_75     TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
  CAACC

0.....16090.....16100.....16110.....16120.....16130....
 
.1614
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCTATGTATTTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
rCRS
ATACT
.......................................................
 
.....
Caucasico_75     GCTATGTATTTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
  ATACT

0.....16150.....16160.....16170.....16180.....16190....
 
.1620
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCT
rCRS
TACAA
.........S.............................................
 
.....
Caucasico_75     TGACCACCTATAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCT
  TACAA

0.....16210.....16220.....16230.....16240.....16250....
 
.1626
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCAAGTACAGCAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCA
rCRS
CCCCT
.......................................................
 
.....
Caucasico_75     GCAAGTACAGCAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCA
  CCCCT

0.....16270.....16280.....16290.....16300.....16310....
 
.1632
      ▼         ▼         ▼         ▼         ▼         
 
▼   
CACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAGTACATAAA
rCRS
GCCAT
..................................S....................
 
.....
Caucasico_75     CACCCACTAGGATACCAACAAACCTACCCACCCTCAACAGTACATAGTACATAAA
  GCCAT

  0.....16330.....16340.....16350.....16360.
        ▼         ▼         ▼         ▼     
rCRS TTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC
  ..........................................
Caucasico_75       TTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC

I: Insertion, D: Deletion, V: Transversion, S: Transition, H:

Heteroplasmy

7. Alignment result - Ancient_Siberian

 ......16030….16040.....16050.....16060.....16070.....16
 
08
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
rCRS
CAACC
.......................................................
 
.....
Ancient_Siberian TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
  CAACC

0….16090.....16100.....16110.....16120.....16130.....16
 
14
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCTATGTATTTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
rCRS
ATACT
.......................................................
 
.....
Ancient_Siberian GCTATGTATTTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
  ATACT

0.....16150.....16160.....16170.....16180.....16190....
 
.1620
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCT
rCRS
TACAA
.......................................................
 
.....
Ancient_Siberian TGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCT
  TACAA

0.....16210.....16220.....16230.....16240.....16250....
 
.1626
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCAAGTACAGCAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCA
rCRS
CCCCT
...................S...................................
 
.....
Ancient_Siberian GCAAGTACAGCAATCAACCTTCAACTATCACACATCAACTGCAACTCCAAAGCCA
  CCCCT

0.....16270.....16280.....16290.....16300.....16310....
 
.1632
      ▼         ▼         ▼         ▼         ▼         
 
▼   
rCRS CACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAGTACATAAA
 GCCAT
..................................S....................
 
.....
Ancient_Siberian CACCCACTAGGATACCAACAAACCTACCCACCCTCAACAGTACATAGTACATAAA
  GCCAT

  0.....16330.....16340.....16350.....16360.
        ▼         ▼         ▼         ▼     
rCRS TTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC
  ...S......................................
Ancient_Siberian   TTATCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC

I: Insertion, D: Deletion, V: Transversion, S: Transition, H:

Heteroplasmy

8. Alignment result - Mongol_216223   

......16030.....16040.....16050.....16060.....16070....
 
.1608
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
rCRS
CAACC
.......................................................
 
.....
Mongol_216223    TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
  CAACC

0.....16090.....16100.....16110.....16120.....16130....
 
.1614
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCTATGTATTTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
rCRS
ATACT
.......................................................
 
.....
Mongol_216223    GCTATGTATTTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
  ATACT

0.....16150.....16160.....16170.....16180.....16190....
 
.1620
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCT
rCRS
TACAA
.......................................................
 
.....
Mongol_216223    TGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCT
  TACAA

0.....16210.....16220.....16230.....16240.....16250....
 
.1626
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCAAGTACAGCAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCA
rCRS
CCCCT
.......................................................
 
.....
Mongol_216223    GCAAGTACAGCAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCA
  CCCCT

0.....16270.....16280.....16290.....16300.....16310....
 
.1632
      ▼         ▼         ▼         ▼         ▼         
 
▼   
CACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAGTACATAAA
rCRS
GCCAT
...............................................S.......
 
.....
Mongol_216223    CACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAGCACATAAA
  GCCAT

  0.....16330.....16340.....16350.....16360.
        ▼         ▼         ▼         ▼     
rCRS TTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC
  ......................................S...
Mongol_216223      TTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGCCCC

I: Insertion, D: Deletion, V: Transversion, S: Transition, H:

Heteroplasmy

9. Alignment result - Mongol_316051   

......16030.....16040.....16050.....16060.....16070....
 
.1608
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
rCRS
CAACC
.......................................................
 
.....
Mongol_316051    TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
  CAACC
 0.....16090.....16100.....16110.....16120.....16130....
 
.1614
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCTATGTATTTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
rCRS
ATACT
.........S...................................V.........
 
.....
Mongol_316051    GCTATGTATCTCGTACATTACTGCCAGCCACCATGAATATTGTACCGTACCATAA
  ATACT

0.....16150.....16160.....16170.....16180.....16190....
 
.1620
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCT
rCRS
TACAA
......................................VV.....S.........
 
.....
Mongol_316051    TGACCACCTGTAGTACATAAAAACCCAATCCACATCAACCCCCCCCCCCCATGCT
  TACAA

0.....16210.....16220.....16230.....16240.....16250....
 
.1626
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCAAGTACAGCAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCA
rCRS
CCCCT
.......................................................
 
.....
Mongol_316051    GCAAGTACAGCAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCA
  CCCCT

0.....16270.....16280.....16290.....16300.....16310....
 
.1632
      ▼         ▼         ▼         ▼         ▼         
 
▼   
CACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAGTACATAAA
rCRS
GCCAT
.......................................................
 
.....
Mongol_316051    CACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAGTACATAAA
  GCCAT

  0.....16330.....16340.....16350.....16360.
        ▼         ▼         ▼         ▼     
rCRS TTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC
  ......................................S...
Mongol_316051      TTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGCCCC
I: Insertion, D: Deletion, V: Transversion, S: Transition, H:
Heteroplasmy

10. Alignment result - Mongol_416223   

......16030.....16040.....16050.....16060.....16070....
 
.1608
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
rCRS
CAACC
.......................................................
 
.....
Mongol_416223    TTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
  CAACC

0.....16090.....16100.....16110.....16120.....16130....
 
.1614
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCTATGTATTTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
rCRS
ATACT
.......................................................
 
.....
Mongol_416223    GCTATGTATTTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
  ATACT

0.....16150.....16160.....16170.....16180.....16190....
 
.1620
      ▼         ▼         ▼         ▼         ▼         
 
▼   
TGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCT
rCRS
TACAA
.......................................................
 
.....
Mongol_416223    TGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCT
  TACAA

0.....16210.....16220.....16230.....16240.....16250....
 
.1626
      ▼         ▼         ▼         ▼         ▼         
 
▼   
GCAAGTACAGCAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCA
rCRS
CCCCT
.......................................................
 
.....
Mongol_416223    GCAAGTACAGCAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCA
  CCCCT

0.....16270.....16280.....16290.....16300.....16310....
 
.1632
      ▼         ▼         ▼         ▼         ▼         
 
▼   
CACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAGTACATAAA
rCRS
GCCAT
.......................................................
 
.....
Mongol_416223    CACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAGTACATAAA
  GCCAT

  0.....16330.....16340.....16350.....16360.
        ▼         ▼         ▼         ▼     
rCRS TTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCC
  ......................................S...
Mongol_416223      TTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGCCCC

I: Insertion, D: Deletion, V: Transversion, S: Transition, H:

Heteroplasmy