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What is genetics?
The study of how traits are inherited
or how genetic information is passed
from one generation to the next.
It also explains biological variation
Gregor Mendel
1850s Grew up in a farm wanting to garden
Austrian monk (Flunked out of college twice) but
became a mathematician
Stamen
Figure 9.2 A
Carpel
Figure 9.2 B
White
2 Transferred
pollen from stamens
of white flower to
carpel of purple flower
Stamens
Carpel
Parents
(P)
Purple
3 Pollinated carpel
matured into pod
4 Planted seeds
from pod
Offspring
(F1)
Figure 9.2 C
White
Axial
Terminal
Seed color
Yellow
Green
Seed shape
Round
Wrinkled
Pod shape
Inflated
Constricted
Pod color
Green
Yellow
Tall
Dwarf
Flower position
Stem length
Figure 9.2 D
Purple
Mendels Theory
of Segregation
An individual inherits a unit of information
(allele) about a trait from each parent
During gamete formation, the alleles
segregate from each other
All P
F1 plants
(hybrids)
All Pp
1
P
2
Gametes
1
p
2
Sperm
P
F2 plants Phenotypic ratio
3 purple : 1 white
Genotypic ratio
1 PP : 2 Pp: 1 pp
Figure 9.3 B
PP
Pp
Pp
pp
Eggs
Purple flowers
F1 generation
White flowers
Fertilization
among F1 plants
(F1 F1)
F2 generation
3
4
of plants
have purple flowers
Figure 9.3 A
1
4
of plants
have white flowers
Vocabulary
When you mate two contrasting true
breeding plants you get a Hybrid.
The true breeding parents are called the P
(parent) generation
The hybrid offspring of the P generation are
called the F1 generation
When two F1 individuals self pollinate you
get the F2 generation
F2 Results of
Monohybrid Cross
Mendels
Monohybrid
Cross Results
F2 plants showed
dominant-torecessive ratio
that averaged 3:1
5,474 round
1,850 wrinkled
6,022 yellow
2,001 green
882 inflated
299 wrinkled
428 green
152 yellow
705 purple
224 white
651 long
stem
207 at tip
787 tall
277 dwarf
AA
Aa
Aa
aa
Dominant
phenotype can
arise 3 ways,
recessive only
one
A Test cross
In a pea plant with purple flowers the
genotype is not obvious. Could be
homozygous or heterozygous
Why do a test cross?
It allows us to determine the genotype of an
organism with a dominant phenotype but
unknown genotype
Test Cross
You cross an individual that shows the dominant
phenotype with an individual with recessive
phenotype ( one who is homozygous recessive for
that trait)
Examining offspring allows you to determine the
genotype of the dominant individual
Punnett Squares of
Test Crosses
Homozygou
s
recessive
a
a
Homozygous
recessive
a
a
Aa
Aa
Aa
Aa
aa
aa
Aa
Aa
Two phenotypes
Testcross:
Genotypes
bb
B_
Offspring
Bb
b
Figure 9.6
or
Bb
All black
Bb
bb
1 black : 1 chocolate
Gene loci
P
b
Recessive
allele
Genotype:
Figure 9.4
PP
aa
Homozygous
for the
dominant allele
Homozygous
for the
recessive allele
Bb
Heterozygous
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tml
Independent Assortment
Mendel concluded that the two units for
the first trait were to be assorted into
gametes independently of the two units
for the other trait
Members of each pair of homologous
chromosomes are sorted into gametes at
random during meiosis
P generation
ry
Gametes RY
ry
Gametes RY
RrYy
RrYy
F1 generation
Sperm
Sperm
1
2 RY
1
2 ry
1
RY
2
F2 generation
Eggs
1
ry
2
Actual results
contradict hypothesis
Figure 9.5 A
rryy
1
1 ry
RY
4
4
1
RY
4
1
ry
4
Eggs
1
Ry
4
1
ry
4
1
RY
4
1 ry
4
RRYY
RrYY
rrYY
RrYy
rrYy
RRYy
RrYy
RRyy
Rryy
RrYy
rrYy
Rryy
rryy
Actual results
support hypothesis
9
16
3
16
3
16
1
16
Yellow
round
Green
round
Yellow
wrinkled
Green
wrinkled
Blind
Blind
Phenotypes
Genotypes
Mating of heterozygotes
(black, normal vision)
Phenotypic ratio
of offspring
Figure 9.5 B
9 black coat,
normal vision
Black coat, blind (PRA) Chocolate coat, normal vision Chocolate coat, blind (PRA)
B_nn
bbN_
bbnn
BbNn
3 black coat,
blind (PRA)
BbNn
3 chocolate coat,
normal vision
1 chocolate coat,
blind (PRA)
TRUEBREEDING
PARENTS:
AABB
GAMETES:
AB
AB
white
flowers,
dwarf
aabb
ab
ab
AaBb
F1 HYBRID
OFFSPRING:
16 Allele
Combinations in F2
1/4
AB
1/4
Ab
1/4
aB
1/4
ab
1/4
AB
1/4
Ab
1/4
aB
1/4
ab
1/16
1/16
1/16
1/16
1/16
1/16
1/16
1/16
1/16
1/16
1/16
1/16
1/16
AaBb Aabb aaBb aabb
Phenotypic Ratios in F2
AaBb
AaBb
Four Phenotypes:
Tall, purple-flowered
(9/16)
(3/16)
Dwarf, white-flowered
(1/16)
Explanation of Mendels
Dihybrid Results
If the two traits
are coded for by
genes
on separate
chromosomes,
sixteen gamete
combinations are
possible
1/4
AB
1/4
Ab
1/4
aB
1/4
ab
1/4
AB
1/4
Ab
1/4
aB
1/4
ab
1/16
1/16
1/16
1/16
1/16
1/16
1/16
1/16
1/16
1/16
1/16
1/16
1/16
AaBb Aabb aaBb aabb
F1 genotypes
Bb male
Formation of sperm
Bb female
Formation of eggs
1
2
1
2
1
2
1
4
B
b
1
4
1
4
F2 genotypes
Figure 9.7
1
2
b
1
4
Dominant Traits
Recessive Traits
Freckles
No freckles
Widows peak
Straight hairline
Free earlobe
Attached earlobe
Figure 9.8 A
Family pedigrees
Can be used to determine individual genotypes
Dd
Joshua
Lambert
D?
John
Eddy
Dd
Abigail
Linnell
dd
Jonathan
Lambert
D?
Abigail
Lambert
Dd
Dd
dd
D?
Hepzibah
Daggett
Dd
Elizabeth
Eddy
Dd
Dd
Dd
dd
Female Male
Deaf
Hearing
Figure 9.8 B
Recessive Disorders
Normal
Dd
Normal
Dd
Sperm
D
Offspring
Dd
Normal
(carrier)
Eggs
Figure 9.9 A
DD
Normal
Dd
Normal
(carrier)
dd
Deaf
VARIATIONS ON MENDELS
LAWS
The relationship of genotype to phenotype is rarely simple
Mendels principles are valid for all sexually reproducing
species
But genotype often does not dictate phenotype in the simple way his
laws describe
(homozygote)
(homozygote)
Pink-flowered F1 plants
(heterozygotes)
Blood
Group
(Phenotype)
Figure 9.13
Genotypes
Antibodies
Present in
Blood
ii
Anti-A
Anti-B
IAIA
or
IAi
Anti-B
IBIB
or
IBi
Anti-A
AB
IAIB
AB
Pleiotropy
Alleles at a single locus may have effects on
two or more traits
Classic example is the effects of the mutant
allele at the beta-globin locus that gives rise
to sickle-cell anemia
Clumping of cells
and clogging of
small blood vessels
Breakdown of
red blood cells
Physical
weakness
Anemia
Impaired
mental
function
Figure 9.14
5,555
Sickle cells
Heart
failure
Paralysis
Pain and
fever
Pneumonia
and other
infections
Accumulation of
sickled cells in spleen
Brain
damage
Damage to
other organs
Rheumatism
Spleen
damage
Kidney
failure
Epistasis:
Interaction between the products of gene
pairs
Interaction between two genes in which one
of the genes modifies the expression of
the other.
Ex: fur /hair color in mammals and albinism
Albinism
Phenotype results when pathway for
melanin production is completely blocked
Genotype - Homozygous recessive at the
gene locus that codes for tyrosinase, an
enzyme in the melanin-synthesizing
pathway
Allele Combinations
and Coat Color
Black coat - Must have at least one
dominant allele at both loci
BBEE, BbEe, BBEe, or BbEE
An example of epistasis
Human Variation
Some human traits occur as a few discrete
types
Attached or detached earlobes
Many genetic disorders
Continuous Variation
Polygenic inheritance results in a
continuous range of small differences in a
given trait among individuals
The greater the number of genes that affect
a trait, the more continuous the variation in
versions of that trait
Environmental effects:
The degree to which an allele is expressed
depends on the environment
Ex: Siamese cat fur color ( enzyme for
melanin production inhibited by heat),
hydrangea flowers ( depends on acidity of
soil), height (nutrition)
Temperature Effects
on Phenotype
Himalayan rabbits are
Homozygous for an allele that
specifies a heat-sensitive
version of an enzyme in
melanin-producing pathway
Melanin is produced in cooler
areas of body
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tml
Morgans experiments
Experiment
Black body,
vestigial
wings
Gray body,
long wings
(wild type)
GgLI
ggll
Male
Female
Offspring
Gray long
Black vestigial
Gray vestigial
Black long
965
944
206
185
Parental
phenotypes
Recombinant
phenotypes
391 recombinants
Recombination frequency =
Explanation
GgLI
(female)
G L
G L
g l
g l
g l
g l
Gl
gL
Eggs
G L
g l
ggll
(male)
g l
Sperm
g l
g l
Offspring
Figure 9.20 C
= 0.17 or 17%
G l
g l
g L
g l
Figure 9.20 B
In Drosophila
White eye color is a sex-linked trait
Figure 9.23 A
CHROMOSOMES
Humans have 22 pairs of AUTOSOMES and one
pair of SEX CHROMOSOMES : total=23 prs
Thomas Morgan discovered SEX LINKED
INHERITANCE studying Drosophila (fruit fly)
In fruit flies red eyes is the wild type and white
eyes is a mutant. He noticed the connection
between gender and certain traits. Only the male
flies had mutant white eyes.
In many organisms
The X chromosome carries many genes unrelated to sex
Identifying Carriers
For an increasing number of genetic disorders
Tests are available that can distinguish carriers of genetic
disorders
Newborn Screening
Some genetic disorders can be detected at birth
By simple tests that are now routinely performed in most
hospitals in the United States
Fetal Testing
Amniocentesis
Needle inserted
through abdomen to
extract amniotic fluid
Ultrasound
monitor
Fetus
Fetus
Placenta
Uterus
Ultrasound
monitor
Placenta
Chorionic
villi
Cervix
Cervix
Uterus
Amniotic
fluid
Centrifugation
Fetal
cells
Fetal
cells
Several
weeks
Figure 9.10 A
Biochemical
tests
Karyotyping
Several
hours
Ethical Considerations
New technologies such as fetal imaging and testing
Raise new ethical questions
Mutations
Mutations are permanent changes in DNA
Causes?
Errors in DNA replication that can be spontaneous.
Also caused by high energy radiation (X rays,
gamma rays),toxic chemicals in the environment
( pesticides,asbestos, tar) and viruses.
Table 9.9
EXAMPLES:
ALBINISM:
SICKLE CELL ANEMIA:
CYSTIC FIBROSIS:
TAY- SACHS DISEASE;
PHENYLKETONURIA;
GALACTOSEMIA:
Dominant Disorders
Some human genetic disorders are dominant
Figure 9.9 B
Karyotype
A karyotype is a visual display of an individuals
chromosomes. A man made picture of a persons 23
pairs of chromosomes. ( the photo is taken during
metaphase when the sister chromatids are lined up
together)
It is useful in sex determination and diagnosis of
certain conditions.
22
+
X
Figure 9.22 A
(female)
Parents
diploid
cells
44
+
XX
22
+
Y
Sperm
22
+
X
Egg
44
+
XX
44
+
XY
Offspring
(diploid)
22
+
XX
22
+
X
76
+
ZW
76
+
ZZ
32
16
Figure 9.22 B
Figure 9.22 C
Figure 9.22 D
The Y chromosome
Has genes for the development of testes
Campodactyly:
Unexpected Phenotypes
Effect of allele varies:
Bent fingers on both hands
Bent fingers on one hand
No effect