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Bioprocess Biosyst Eng (2015) 38:399–405

DOI 10.1007/s00449-014-1279-1

ORIGINAL PAPER

Increased polysaccharide production and biosynthetic gene


expressions in a submerged culture of Ganoderma lucidum
by the overexpression of the homologous a-phosphoglucomutase
gene
Jun-Wei Xu • Sen-Lin Ji • Huan-Jun Li •

Jiang-Sheng Zhou • Yan-Qing Duan •


Li-Zhi Dang • Ming-He Mo

Received: 29 June 2014 / Accepted: 31 August 2014 / Published online: 14 September 2014
 Springer-Verlag Berlin Heidelberg 2014

Abstract This study aimed to improve the production of Keywords Polysaccharide  Ganoderma lucidum 
polysaccharide by engineering the biosynthetic pathway in Genetic engineering  a-Phosphoglucomutase (PGM) 
Ganoderma lucidum through the overexpression of a- Biosynthetic genes
phosphoglucomutase (PGM) gene. PGM is responsible for
the linkage between sugar catabolism and sugar anabolism.
The effects of PGM gene overexpression on intracellular Introduction
polysaccharide (IPS) content, extracellular polysaccharide
(EPS) production and transcription levels of three genes Medicinal mushrooms have attracted much attention as
encoding the enzymes involved in polysaccharide biosyn- sources for the development of drugs and nutraceuticals in
thesis, including PGM, UDP-glucose pyrophosphorylase recent years [19, 34]. Ganoderma lucidum, a famous
(UGP), and b-1,3-glucan synthase (GLS), were investi- medicinal mushroom, is used as a medication for the pre-
gated. The maximum IPS content and EPS production in G. vention and treatment of various human diseases for cen-
lucidum overexpressing the PGM gene were 23.67 mg/ turies in Asia [30, 32]. Currently, much interest is now
100 mg dry weight and 1.76 g/L, respectively, which were focused on the polysaccharide fractions containing b-1,3-
higher by 40.5 and 44.3 % than those of the wild-type and 1,6-glucans produced by G. lucidum due to their
strain. The transcription levels of PGM, UGP and GLS important biological activities such as anti-oxidant, anti-
were upregulated by 4.77-, 1.51- and 1.53-fold, respec- cancer, anti-inflammatory, and immunomodulatory activi-
tively, in the engineered strain, suggesting that increased ties [28, 29]. The biosynthetic pathways of polysaccharides
polysaccharide biosynthesis may result from a higher involve the biosynthetic pathways for the nucleotide sugar
expression of those genes. precursors, assembly of the repeating monosaccharide
units, and the process of polymerization [6, 11, 21, 23].
Among the polysaccharide biosynthetic enzymes, phos-
J.-W. Xu and S.-L. Ji have contributed equally to this work. phoglucomutase (PGM) and UDP-glucose pyrophosphor-
ylase (UGP) are important enzymes in the biosynthetic
J.-W. Xu (&)  S.-L. Ji  H.-J. Li  J.-S. Zhou
pathway of nucleotide sugar precursors. PGM catalyzes the
Faculty of Life Science and Technology, Kunming University of
Science and Technology, Kunming 650500, China inter conversion of glucose-6-phosphate into glucose-1-
e-mail: jwxu@kmust.edu.cn; xjuwei@163.com phosphate; UGP catalyzes the reversible conversion of
glucose-1-phosphate and UTP into UDP-D-glucose. b-1,3-
Y.-Q. Duan  L.-Z. Dang
glucan synthase (GLS) catalyzes the repetitive addition of
Hongyun Honghe Tobacco (Group) Co. Ltd,
Kunming 650202, China glucose from UDP-glucose to growing glycan chains [6,
11, 23].
M.-H. Mo (&) Submerged cultures offer a promising alternative to
Laboratory for Conservation and Utilization of Bio-resources
obtain large quantities of polysaccharides and are fast,
and Key Laboratory for Microbial Resources of the Ministry of
Education, Yunnan University, Kunming 650091, China cost-effective, and easy to control. Many medicinal
e-mail: minghemo@163.com mushroom polysaccharides are being commercially

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produced by submerged cultures [5, 9, 10]. In addition Materials and methods


to intracellular polysaccharide (IPS) obtainable from the
biomass, mycelia cultures also excrete extracellular Strain and culture conditions
polysaccharide (EPS) into the fermentation broth.
Polysaccharides of G. lucidum have gained wide Ganoderma lucidum CGMCC 5.616 from the China Gen-
attention due to their important bioactivities. Thus, eral Microbiological Cultivation Center was maintained on
several approaches are adopted to increase its IPS and potato dextrose agar slants and cultured at 30 C for
EPS production. These include the manipulation of 7 days. The details of preculture medium and conditions
fermentation conditions [1, 8, 9, 13, 16], addition of were described earlier [30, 36]. For the shake flask fer-
inducers [14, 18, 37, 38], and development of new mentation, a 45-mL medium in a 250-mL flask was inoc-
bioprocessing strategies [15, 24, 35, 39]. However, ulated with 5 mL of second-stage preculture broth [at an
higher yields of polysaccharide are needed for com- inoculum size of 300–330 mg dry weight (DW)/L]. The
mercial applications. A highly productive strain is the culture was incubated in the dark at 30 C on a rotary
primary factor to achieve an industrial level polysac- shaker at 120 rpm for 12 days. For plasmid construction,
charide production. One promising approach to increase Escherichia coli strain DH5a was used and grown on
polysaccharide yield is to manipulate the expression Luria–Bertani (LB) agar plates containing 100 lg/mL
levels of the biosynthetic genes [4, 17, 25]. Genetic ampicillin. CYM medium (1 % maltose, 2 % glucose,
manipulation has been successfully used to enhance 0.2 % yeast extract, 0.2 % tryptone, 0.05 % MgSO4,
exopolysaccharide production in Streptococcus thermo- 0.46 % KH2PO4, 0.6 M mannitol, 1 % agar) was used for
philus [17], Lactococcus lactis [4] and Sphingomonas regeneration of protoplasts from G. lucidum.
S7 [25]. An engineered strain for efficient production of
polysaccharide may allow for a sustainable and indus- Vector construction
trial scale production of these valuable metabolites.
However, no study reported the enhancement of poly- The plasmid pJW-EXP [33] was used as a backbone to
saccharide production through genetic manipulation of construct the vector pJW-EXP-PGM. The G. lucidum PGM
basidiomycetes. gene was amplified from genome DNA using primers
PGM is a key enzyme in the biosynthetic pathway of PGM-NheI-F (50 -GCTAGCATGTCGTACCAGGTCAAG
nucleotide sugar precursors. This enzyme catalyzes a step GAG-30 ) and PGM-SmaI-R(50 -GGGCCCCTACGTGATG
representing a branch point in carbohydrate metabolism; ACGGTCGGC-30 ). The vector pJW-EXP-PGM was made
glucose-6-phosphate enters catabolic processes to yield by digesting pJW-EXP with both NheI and SmaI, and
energy and reducing power, whereas glucose-1-phosphate inserting the NheI-SmaI PCR fragment containing the
is a precursor of sugar nucleotides that are used by cells in G. lucidum PGM gene.
the synthesis of various polysaccharides [21]. Expression
of PGM gene had a positive correlation with the polysac- Transformation of G. lucidum and molecular analysis
charide production in several bacteria such as Streptococ- of the transformants
cus [7], Lactobacillus helveticus [26] and Pediococcus
parvulus [27]. In Streptococcus pneumoniae, deletion of Protoplasts of G. lucidum were prepared as described by Xu
PGM gene decreased capsule biosynthesis to \10 % [12]. et al. [31]. The expression vector pJW-EXP-PGM was trans-
These observations indicated that the PGM gene is a vital ferred into G. lucidum protoplasts according to the method
regulatory gene for polysaccharide biosynthesis. In G. lu- described by us earlier [33].The transformants were selected
cidum, Tang et al. [23] reported that there is a linear and transferred to fresh CYM medium containing carboxin
relationship between the PGM activity and EPS produc- (2 lg/mL), which was repeated five times to obtain stable
tion. However, the regulation of polysaccharide biosyn- transformants. The stable transformants were identified for
thesis by overexpression of the PGM gene remains to be integration of the fusion fragment of gpd promoter and PGM
elucidated. gene by PCR using primers gpd-F (50 -GGGTTCCCCTCG
In this study, we investigated the effects of the TTCAAGC-30 ) and PGM-R(50 - AGCGCAAGTCAGCATTC
overexpression of PGM gene on cell growth, IPS con- TCATAT-30 ) that should give a 1.37-kb fragment.
tent, EPS production and transcription levels of three
biosynthetic genes, namely, PGM, UGP, and GLS, in a Sampling, analysis of cell dry weight, residual sugar
submerged culture of G. lucidum. This study is helpful in medium, EPS production and IPS content
for further investigations on the polysaccharide biosyn-
thesis regulation and the development of more efficient Mycelia were harvested by centrifuging a sample at
mushroom fermentations for polysaccharide production. 10,000g for 10 min, and the precipitated cells were washed

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Bioprocess Biosyst Eng (2015) 38:399–405 401

for three times with distilled water and then dried at 50 C relative to this reference level. Post qRT-PCR calculations
to constant weight. The dry cell weight was measured by to analyze relative gene expression were performed
the gravimetric method. The residual sugar was measured according to the 2DDCT method.
according to the method described by Miller [20]. For the
determination of EPS, after removal of mycelia by centri- Statistical analysis
fugation, the crude EPS was precipitated with addition of
95 % (v/v) ethanol by four times of volume, then separated Data are the averages of three independent sample mea-
by centrifugation at 13,000 rpm. The insoluble components surements. The error bars indicate the standard deviations
were suspended in 1 M NaOH at 60 C for 1 h, and the from the means of triplicates. The data were analyzed with
supernatant was measured by phenol–sulfuric acid method. the Student t test. The difference between contrasting
For the analysis of IPS, the dried mycelia (100 mg) were treatments was considered significant when P was\0.05 in
extracted by using 1 M NaOH at 60 C (1 h), then the a two-tailed analysis.
supernatant was assayed by phenol–sulfuric acid method.

Nucleic acids extraction and cDNA synthesis Results and discussion

Ganoderma lucidum mycelia were harvested, frozen in Overexpression of PGM gene in G. lucidum
liquid nitrogen, and ground to a fine powder with a mortar
and pestle. The genomic DNA was extracted using the Recently, the genome sequence of G. lucidum has been
CTAB method, and the total RNA was extracted using reported [6]. In this study, we successfully amplified the
TriZol Reagent (Invitrogen, Carlsbad, CA, USA). The PGM gene from the genome of G. lucidum. The genomic
quality and quantity of DNA and RNA samples were sequence was submitted to the DDBJ/EMBL/GenBank
determined by ethidium bromide stained agarose gel nucleotide sequence database under accession no.
electrophoresis and spectrophotometric measurements. KJ591029. The entire genome DNA of G. lucidum PGM
Residual genomic DNA in isolated total RNA was removed was 2038-bp long and has an open reading frame of 579
using RNase-free DNase I (MBI Fermentas, Canada) amino acids giving a predicted molecular mass of
according to the manufacturer’s protocol. Reverse tran- 63.5 kDa. The 579-amino acid protein product of PGM
scription was achieved using total RNA as starting material showed 85 % identity to PGM of Dichomitus squalens,
and the Superscript RNAase H- First-strand synthesis kit 79 % identity to PGM of Trametes versicolor, 52 %
(Invitrogen, Carlsbad, CA, USA). identity to PGM of Neurospora crassa, and 51 % identity
of PGM of Agrobacterium tumefaciens. The amino acid
Measure of pgm, ugp and gls expression by real-time sequences and locations of two peptide segments, which
quantitative PCR (qRT-PCR) are useful to identify PGM are shown in Fig S1. The first
and second segments contain the amino acids (G… T.
The transcription levels of the pgm, ugp, and gls (which SHNP and D. D. D, respectively) believed to comprise a
encode the enzymes PGM, UGP, and b-1,3-glucan syn- highly conserved site residing in a deep crevice of the
thase, respectively) were analyzed by qRT-PCR. The enzyme, which is involved in phosphate transfer. Phylo-
sequences of the primer for amplification of 18S rRNA were genetic analysis also demonstrated the homology between
described previously [31]. For pgm, ugp and gls, the fol- G. lucidum PGM and PGMs from various organisms
lowing primer sets were used: pgm-forward, 50 -GGGCCT (Fig. S2).
GAGGAAGAGGGTGA-30 and pgm-reverse, 50 -CGGTTT To better increase the carbon flux to a sufficiently high
CGGGGGAGAAGTAG-30 ; ugp-forward, 50 -TGGTCTCG level to improve polysaccharide production, the gene
GAACTTCTATGGG-30 and ugp-reverse, 50 -CAGTGCTT encoding G. lucidum a-phosphoglucomutase, which cata-
CTTCTCGTCCTCA-30 ; gls-forward, 50 -TCGTTTGGGTT lyzes conversion of the glycolytic intermediate glucose
GGGTCTGT-30 and gls-reverse, 50 -GAAGCCCTTGTCGC 6-phosphate to glucose 1-phosphate was overexpressed.
TCTGC-30 . The 18S rRNA gene was used as the internal The expression vector pJW-EXP-PGM, which encodes the
control gene, because its expression was found to be stable PGM gene from the G. lucidum genome that contained
under our experimental conditions. The expression level of introns, was constructed (Fig. 1a) and used to transform the
the different genes was normalized with respect to the 18S WT strain using a homologous transformation system
rRNA gene expression level. For each gene, an expression developed in our laboratory [33]. The PGM gene was
level of 1 was assigned to the samples from the wild-type controlled through the strongly constitutive glycer-
(WT) strain, and the expression levels in G. lucidum over- aldehyde-3-phosphate dehydrogenase gene (gpd) promoter
expressing the PGM gene are presented as the fold changes and the iron–sulfur protein subunit of succinate

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Fig. 1 a Structure of the vector pJW-EXP-PGM used for G. lucidum genomic DNA isolated from different strains. lane N negative control,
transformation. See methods section for descriptions on the construc- lane WT wild-type strain, Line PGM the PGM gene overexpressed
tion of this vector. b Identification and characterization of the PGM strain, lane P pJW-EXP-PGM as positive control, lane M DL 2000
gene overexpressed (PGM) strain. Amplification pattern obtained DNA marker
with primers for the fusion gpd promoter-PGM gene fragment in

dehydrogenase gene (sdhB) terminator of G. lucidum in the


vector pJW-EXP-PGM. The carboxin resistance was used
to select putative transformants. The putative transformants
were transferred to a selective CYM medium after five
rounds of growth on a non-selective medium (without
carboxin antibiotics). All tested transformants continued to
grow on the selective medium. The integration of the PGM
gene in the carboxin-resistant strains was confirmed with
PCR. The PCR product showed a clear band for the fusion
gpd promoter and PGM gene fragment (1.37 kb) in the
PGM transformant. However, no corresponding band was
observed in the WT strain (Fig. 1b). In addition, no mor-
phological difference was observed between the PGM
Fig. 2 Transcriptional levels of three biosynthetic genes, namely,
transformant and WT strain (data not shown). The total
PGM (blank), UGP (gray) and GLS (dark), in the WT strain and the
RNA of different strains was isolated. The qRT-PCR PGM strain. Expression of the samples from the WT strain is defined
analysis was conducted to compare the PGM gene as 1.0, and expression levels in the PGM strain are displayed as the
expression levels in the transformant and WT strain. The fold increase over the reference sample. d days, asterisk indicates
statistical significance (P \ 0.05) compared to the WT
results showed that the PGM gene was overexpressed in the
PGM transformant by about twofolds higher than that of
the control on day 0 (Fig. 2).
EPS production were significantly higher compared with
Enhanced polysaccharide production in G. lucidum that of the WT stain. The results confirmed the consistency
overexpressing the PGM gene of the PGM gene overexpression. One overexpressing
transformant (PGM1) was chosen with the WT strain to
The maximum biomass, IPS content and EPS production study the kinetic profiles of cell growth, sugar consump-
were assayed in the WT and three PGM-overexpressing tion, IPS content, and EPS production. Figure 3 shows that
strains. The maximum biomass of all strains was reached the maximum dry cell weights in the WT and PGM strains
on day 12, and the maximum IPS content and EPS pro- were 7.48 and 8.12 g/L, respectively. Compared to the WT
duction were obtained on days 9 and 12, respectively. The strain, overexpression of the PGM gene only slightly
IPS content and EPS production in the three pJW-PGM affected cell growth. The time profiles of IPS content and
transformed G. lucidum strains, namely, PGM1, PGM2, EPS production in the WT and PGM strains are shown in
and PGM3, were shown in Table 1. The IPS content and Fig. 4. For the PGM strain, IPS content reached the highest

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Bioprocess Biosyst Eng (2015) 38:399–405 403

level on day 9 and then gradually decreased, thereafter, fermentation. The maximum IPS content in the PGM strain
although still at a higher level than the WT. The EPS was 23.67 mg/100 mg DW, which was about 1.4-fold of
production showed similar profiles in the WT and PGM that obtained in the WT strain (13.51/100 mg DW). The
strains. The EPS production increased during the fermen- maximum IPS content in the PGM strain was 1.26 times
tation and reached its maximum value at the end of higher than that reported for a submerged culture of G.
lucidum by simultaneously adopting a strategy of multiple
Table 1 Maximum IPS content and EPS production in different cell Cu2? additions, three-stage light irradiation and multi-
lines pulse feeding of carbon and nitrogen sources [39].The
Cell Biomass IPS content EPS production maximum EPS production in the PGM strain was 1.76 g/L,
line (g/L) (mg/100 mg DW) (g/L) which was 1.44 higher than that obtained in the WT strain.
In Sphingomonas S7, the overexpression of PGM gene
WT 7.53 ± 0.26 14.16 ± 1.03 1.19 ± 0.03*
resulted in a small increase of S-7 polysaccharide pro-
PGM1 8.31 ± 0.31 24.37 ± 2.18* 1.84 ± 0.04*
duction [25]. In S. thermophilus, Levander et al. [17]
PGM2 7.85 ± 0.42 21.21 ± 2.15* 1.72 ± 0.05*
reported that the overexpression of PGM gene in combi-
PGM3 8.02 ± 0.28 23.23 ± 1.80* 1.78 ± 0.02*
nation with UDP-glucose pyrophosphorylase gene
The maximum IPS content and EPS production were reached on days enhanced the EPS synthesis about twofolds, although no
9 and 12, respectively effect could be seen when either gene was overexpressed
mg DW milligram dry weight alone. Our result is the first observation on the enhanced
* Significantly different from value for WT (P \ 0.05) polysaccharide production through the overexpression of
biosynthetic genes in mushroom. The flux-controlling
function of PGM may be dependent on strain and the
produced type of polysaccharide [2, 3, 7]. The overex-
pression of PGM gene resulted in an enhanced accumula-
tions of IPS and EPS, which indicated that PGM is a key
enzyme for polysaccharide biosynthesis in G. lucidum. The
results agree with previous reports, which showed that
PGM activity correlated with production of polysaccharide
produced by S. thermophiles [7] and G. lucidum [23].

Upregulation of polysaccharide biosynthetic gene


expressions in G. lucidum overexpressing the PGM
Fig. 3 Kinetic profiles of cell growth (circles) and residual sugar gene
(triangles) in the WT strain (blank) and the PGM strain (dark). The
error bars indicate the standard deviations from three independent
samples. d days, asterisk indicates statistical significance (P \ 0.05) Previous studies have reported that the increased pro-
compared to the WT duction of polysaccharide accompanied the upregulated

Fig. 4 Kinetic profiles of IPS content (a) and EPS production (b) in samples. d days, asterisk indicates statistical significance (P \ 0.05)
the WT strain (blank circles) and the PGM strain (dark circles). The compared to the WT
error bars indicate the standard deviations from three independent

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expression of the biosynthetic genes [4, 22]. To explore 2. Boels IC, Kleerebezem M, de Vos WM (2003) Engineering of
the underlying molecular mechanism for the higher carbon distribution between glycolysis and sugar nucleotide
biosynthesis in Lactococcus lactis. Appl Environ Microbiol
polysaccharide production in G. lucidum overexpressing 69(2):1129–1135
the PGM gene, the expression kinetics of three important 3. Boels IC, Ramos A, Kleerebezem M, De Vos WM (2001)
genes, namely, PGM, UGP, and GLS in the WT and Functional analysis of the Lactococcus lactis galU and galE
PGM strains were examined using qRT-PCR. Gene genes and their impact on sugar nucleotide and exopolysaccha-
ride biosynthesis. Appl Environ Microbiol 67(7):3033–3040
expression was normalized against the expression level of 4. Boels IC, van Kranenburg R, Kanning MW, Chong BF, de Vos
the 18S rRNA gene. Figure 2 showed that the overex- WM, Kleerebezem M (2003) Increased exopolysaccharide pro-
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lation of PGM mRNA throughout the cultivation period. sion of the NIZO B40 eps gene cluster. Appl Environ Microbiol
69(8):5029–5031
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in the PGM strain were about 4.2 and 4.77 times higher polysaccharide production and antioxidant activity in submerged
than that of the WT strain, respectively. In the case of the cultures of Inonotus obliquus by lignocellulose decomposition.
UGP gene, the highest transcription level in the PGM J Ind Microbiol Biotechnol 38(2):291–298
6. Chen SL, Xu J, Liu C, Zhu YJ, Nelson DR, Zhou SG, Li CF,
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Science Foundation of China (31360495), the start-up grant from Biosyst Eng 32(2):217–224
Kunming University of Science and Technology (KKSY201226107), 15. Lee KM, Lee SY, Lee HY (1999) Bistage control of pH for
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