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Abstract
In this paper a dengue transmission mathematical model has been developed. The model assumes
that human population is divided into three sub-populations: susceptible, infective and recovered
sub-population, while the mosquito population is divided into two sub-populations: susceptible and
infective. It is also assumed that the survival rates for humans and mosquitoes decrease with age. Two
basic reproduction numbers are derived, namely, the host-to-vector basic reproduction number and
the host-to-host basic reproduction number. An illustration on how to estimate the basic reproduction
numbers from dengue incidence data is presented using the dengue incidence data during the 2002–2007
dengue outbreaks in Bandung, Indonesia.
Keywords: Dengue transmission; mathematical model; basic reproduction number; Bandung, Indonesia.
#
E-mail: aksupriatna@bdg.centrin.net.id, ak_supriatna@unpad.ac.id
one third of the 240 million people of developed[12,13] in an attempt to eliminate the
Indonesia live. Almost 60% of them live on the disease, such as the study on the effects of
island of Java. Bandung, as one of the biggest vaccination in single serotype and in multiple
cities in Java has been experiencing severe serotype dengue infections[14-16] and in an age-
dengue infection ever since it was reported structured population.[17]
for the first time in 1969.[4] A recent study in
a cohort of adult population shows that all One important epidemiological concept
the four known serotypes are circulating in related to minimum vaccination coverage
Bandung, with DENV-2 predominating.[5] is the basic reproduction number.[18] The
present paper discusses a method of how
For the prevention and control of dengue to compute this basic reproduction number,
epidemic in Indonesia, in general, there are which, in dengue cases, is slightly difficult due
three critical strategies: (i) DF/DHF case and to the presence of the indirect transmission
vector surveillance; (ii) disease management; of the disease and other complications such
and (iii) changing behaviours of communities as different serotypes of the agents. We then
and building partnerships in order to reduce apply the theory to estimate the value of
the presence, or improve the management, the basic reproduction number during the
of larval habitats.[6] Various applications of period of dengue outbreaks (2002–2007) in
insecticides, including the application of ultra- Bandung. In the next section we develop a
low volume (ULV), have been used in order to mathematical model for dengue transmission
reduce the larval and adult populations of the as a basis for the computation of the basic
vectors.[7,8] Nonetheless, the dengue incidence reproduction number used in the subsequent
rates, number of reported cases and deaths, sections.
and affected areas under DHF during the
period 1992–2004 were alarming.
I H (t ) = I H0 (t ) + ∫ BH QH (a ) 1 − e ∫t −a
t −
e da
t −a
RH (t ) = RH0 (t ) + ∫ BH QH (a ) 1 − e ∫t −a
t −
1 − e da
t −a
SV (t ) = SV0 (t ) + ∫ BV QV (a )e ∫t −a
t − bV I H ( s ) ds
conditions for the host population is given by da , (6)
0
N H (0), then we have:
t
0
with N H (t ) = N H (0)QH (t ) . Furthermore, bV I H ( s ) ds
t
, (7)
IV (t ) = IV0 (t ) + ∫ BV QV (a ) 1 − e ∫t −a
t −
t
limt →∞ I H0 (t ) and limt →∞ RH0 (t ) are all equal to
S H (t ) = S H0 (t ) + ∫ BH QH (a )e ∫t −a
t − b H IV ( s ) ds
da (2) zero, so does the same thing for the vector.
0 ,
The full model for the host-vector SIR
∞
I H* = ∫ BH QH (a ) 1 − e − b H IV a e −γ a da
*
R0γ =
(B b H H ∫
∞
0 )(
aQHγ (a )da BV bV ∫ aQV (a )da
0
∞
)
0 , (8) ∞ 1 − e − b H IV a
*
∞ 1 − e − bV I H a
*
BH ∫ 0 QH (a ) da BV ∫ QV (a )
γ
da
I * 0 IV*
H
0
∞
IV* = ∫ BV QV (a ) 1 − e − bV I H a da
*
, (9) =
(b I *
H H ∫
∞
0 )(
aQHγ (a )da bV IV* ∫ aQV (a )da
∞
0 )
(∫ ( )da )(∫ ( )da )
∞ ∞
γ − b H IV* a − bV I H* a
Q (a) 1 − e
H QV (a ) 1 − e
0 0
γ
if R > 1 , in which:
0
which can be further simplified as:
0 ( 0
∞
R = BH b H ∫ aQH (a )e
γ −γ a
)( ∞
da BV bV ∫ aQV (a )da
0 ). (10) 1 1 1 1
2 2
1 1 1 1
2 2
R0γ = aH Μ H aV µV = aH Μ H aV µV
1 1
1 1 ΜH + − Μ H µV + − µV
It is also shown that the threshold number −
1
1
−
1
1
aH aV
ΜH Μ + µV µ +
R0γ also determins the stability of the resulting
H
a
H
V
aV
Μ H Μ H + 1 µV µV + 1
aH aV
endemic equilibrium point.[23] In the following 1 1 1 1 1 1
= ΜH + µV + = 1 + 1 +
section we show that the value of the basic ΜH aH µV aV Μ H aH µV aV
the geometric average of the expected number However, if we derive the basic
of new cases in human population caused by reproduction number using the next generation
one infected mosquito during its entire period matrix in [19, eq. 5.9 p. 75; see also Appendix
of infectiousness and the expected number of B], then we have:
new cases in the mosquito population caused
by one infected human during his/her entire
1 B 1 B
period of infectiousness. R0G = b H H bV V .
µV µ H ( µ H + γ ) µV (13)
However, some authors have pointed out
that the basic reproduction number measured
per generation basis is less useful when the It can be verified that R0G is comparable
control effort needed to eliminate a host-vector to the known form of the basic reproduction
disease (such as dengue) is to be targeted at number. [10] If we denote R00 as the basic
only the host population.[24] They argue that the reproduction number for the SI model, that
expected number of secondarily infected hosts is R0γ with γ = 0 , then we have the following
that results from a single infected host is the relation:
square of the host-vector basic reproduction
number, since two generations are required to
R0γ < R0G < R00 , (14)
transmit an infection from host to host: the first
generation due to infection from a host to the
vector population and the second generation with
due to infection from infected vectors back
to the host population. Hence, R0γ ≡ R0γ is R0G R00 µ H + γ
= = > 1 , (15)
the host-to-vector basic reproduction number R0γ R0G µH
γ
and R0 is the host-to-host basic reproduction
number. We note that using host-vector basic which consequently is,
reproduction certainly underestimates the
control effort needed to eliminate the disease,
if the only target of control is host population, R0G = R00 R0γ . (14)
such as in host vaccination programme, since
the resulting minimum vaccination coverage The next section will illustrate the
implementation of the theory developed in this
1 1 section with the data during the 2002–2007
is given by: pc = 1 − < 1 − γ .[22]
R0γ R0 dengue outbreaks in Bandung.
Note that if we derive the basic
reproduction number directly from (10) then
we have: The basic reproduction
number in Bandung, Indonesia
BH b H BV bV
R0γ = 2 2 . (12)
We collected data consisting of the number of
( µ H + γ ) µV
suspected and/or confirmed dengue patients
from three major hospitals in Bandung,
Advent, Muhammadiyah and St. Yusuf
Hospitals, during the dengue outbreaks from The yearly patients’ distribution is shown in
2002 up to 2007. We also collected data from Figure 1. During the period 2002–2005, this
all existing puskesmas (community health yearly number of patients was approximately
centres). Both data sets consist of patients’ 0.15% of the total population of the city for
name and age at the time they registered the respective year.
at the hospital or puskesmas due to dengue
illness symptoms. Figure 2 shows that during the period
2002–2007, the dengue incidence steadily
A total of 22 981 patients, comprising increased for three different classes: babies/
12 030 patients from hospitals and 10 951 toddlers, teenagers and adults. This figure
patients from puskesmas, were analysed. reveals that marginal increase of the older
class is slightly greater that those for the Figure 4: Mean age at infection decreases
younger classes. A similar trend was also during the outbreak period 2002–2005
observed in other regions of Indonesia [25] followed by increase in the periods
and was consistent with those reported on a afterwards
nationwide scale that there is a shifting of age
of infection to older classes.[3,26] This is true for
other countries as well.[27,28]
Another human parameter we need to 10 days.[33,34] Taking into account those facts,
find the estimation of the basic reproduction many authors argued that the life expectancy
number is the rate of recovery γ . The value of the mosquitoes must be at least 12 days.
of the average infectious period, that is, the We will assume that the value of this life
inverse of the rate of recovery, is believed to expectancy in the field is approximately 14
be between three and eight.[30] Other scientists days as many scientists believe.[35,36,37] We
suggest that this average infectious period is also assume that to enable transmission, the
six days,[31] and hence human recovery rate is average at infection for the mosquitoes is as
1/6 per unit time. early as the second day of their adult life stage.
The resulting basic reproduction numbers
We also need the Ae. aegypti life for various times of outbreak using different
expectancy. There are numerous values of sampling data sets are figured out in Table 2.
life expectancy used in literatures, ranging
from three days – in the field – to more than
90 days – when reared in laboratory.[32] Maciel- Concluding remarks
de-Freita et al.[32] also pointed out that Ae.
aegypti must survive for periods longer than The estimation of dengue basic reproduction
the sum of the initial non-feeding period plus number in Bandung presented in this paper is
the virus’ extrinsic incubation period in order considered to be among the first attempts to
to be able to transmit the disease to another be made for such a study. The resulting basic
human. Nulliparous females usually do not reproduction numbers derived by the present
γ
method, R0 and R0 in Table 2, are noticeably
G
blood-feed for ≥2 days and the extrinsic
incubation period of dengue virus is at least higher than the known estimated basic
2003 22.48 72.52 0.1667 5.8145 2.8295 4.0561 33.8078 8.0059 16.4518
Hospitals 2004 21.35 72.54 0.1667 5.9314 2.8295 4.0967 35.1813 8.0062 16.7829
2005 19.33 72.56 0.1667 6.1669 2.8296 4.1773 38.0300 8.0068 17.4499
2006 20.70 72.58 0.1667 6.0042 2.8295 4.1218 36.0502 8.0064 16.9891
2004 21.29 72.54 0.1667 5.9378 2.8295 4.0989 35.2579 8.0062 16.8012
2005 18.46 72.56 0.1667 6.2806 2.8297 4.2157 39.4453 8.0071 17.7719
Puskesmas
2006 19.50 72.58 0.1667 6.1463 2.8296 4.1703 37.7764 8.0067 17.3916
2007 21.63 73.39 0.1667 5.9282 2.8295 4.0956 35.1438 8.0061 16.7739
aH = Human’s average age at infection are computed from the data sets
aV = 2 days
LV = 14 days
reproduction numbers for dengue infection The result presented here is a crude
from a neighbouring country, Singapore,[38] approximation of the true value of the basic
and from other countries.[31,39,40,41] In general, reproduction number since we ignored some
the estimates of dengue reproduction numbers details of the structure and transmission
vary considerably between studies while the mechanism of the disease. Other factors that
reasons behind this variability are still not well- are worthy of being taken into account are
explained.[42] However, we can argue that our the intrinsic and extrinsic incubation times.
results are certainly higher than those of others By taking these factors into consideration we
since we follow the argument by Roberts MG, predict that the resulting basic reproduction
et al.[24] that the host-vector basic reproduction number will be discounted by the delay time of
number should be computed as a second- incubation periods (see [17] as an illustration).
generation host-to-host basic reproduction Other factors, such as the presence of multiple
number when it is only host population that strains, may also increase the realism of the
is to be controlled. model, and hence, refine the estimate of the
basic reproduction number.
Acknowledgements ∞
I H* = ∫ BH QH (a ) 1 − e − b H IV a e −γ a da ≡ F1 ( IV* ) , (A.6)
*
0
This work was supported financially by the
∞
Indonesian Government (the Directorate of IV* = ∫ BV QV (a ) 1 − e − bV I H a da ≡ F2 ( I H* ) . (A.7)
*
d ( F1 F2 )(0)
if > 1 , which is equivalent to
dI H
b H IV ( s ) ds − γ a
t
I H (t ) = ∫ BH QH (a ) 1 − e ∫t −a
∞ −
e da , (A.2)
0
(B b H H ∫
∞
0 )(
aQH (a )e −γ a da BV bV ∫ aQV (a )da > 1
0
∞
)
or simply R > 1 , with R being the threshold
γ γ
b H IV ( s ) ds
t
RH (t ) = ∫ BH QH (a ) 1 − e ∫t −a
∞ − 0 0
1 − e da , (A.3)
−γ a
0
number as in equation (10).
SV (t ) = ∫ BV QV (a )e ∫t −a
∞ − bV I H ( s ) ds
da ,
0
(A.4) Appendix B
bV I H ( s ) ds
t
Let kij denote the expected number
IV (t ) = ∫ BV QV (a ) 1 − e ∫t −a
∞ −
da . (A.5)
0
of new cases of type i , caused by one
infected individual of type j , during the
entire period of infectiousness. In this case,
Considering that we are only interested i, j ∈ {1, 2}. Moreover, let type 1 be infection
in the infective compartments without loss in host and type 2 be infection in vector, and
of generality, we can concentrate only on by considering the exponential survival rates
the sub-system (A.2) and (A.5), in which the −µ a
equilibrium of the sub-system is given by QH (a ) = e − µ a and QV (a ) = e
H
, then we have: V
* 1 1
( I H* , IV* ) with I H* and IV satisfying k11 = 0 , k12 = b H S H* , k21 = bV SV
*
,
µV (µH + γ H )
References
[1] Hotta S, Miyasaki K, Takehara M, Matsumoto [7] Suroso T. Dengue haemorrhagic fever in
Y, Ishihama Y, Tokuchi M et al. Clinical Indonesia – epidemiological trends and
and laboratory examinations on a case of development of control strategy. Dengue
“hemorrhagic fever” found in Surabaja, Bulletin. 1996;20:35-40.
Indonesia, in 1968. Kobe J Med Sci.
1970;16(4):203-210. [8] World Health Organization, Regional Office for
South-East Asia. Dengue/dengue haemorrhagic
[2] Kho LK, Wulur H, Himawan T, Thaib S. Dengue fever prevention and control programme in
haemorrhagic fever in Jakarta (follow up study). Indonesia: report of an external review, Jakarta,
Paediatr Indones. 1972;12(1):1-14. 5-19 June 2000. Document SEA-Haem.
Fever-73/SEA-VBC-79. New Delhi: WHO/
[3] Setiati TE, Wagenaar JFP, de Kruif MD, Mairuhu SEARO, 2001.
ATA, van Gorp ECM, Soemantri A. Changing
epidemiology of dengue haemorrhagic fever in [9] Esteva L, Vargas C. Analysis of a dengue
Indonesia. Dengue Bulletin. 2006;30:1-14. disease transmission model. Math Biosci.
1998;150:131.
[4] Rivai A, Hamzah S, Rahman O, Thaib S. Dengue
and dengue haemorrhagic fever in Bandung. [10] Soewono E, Supriatna AK. A Two-dimensional
Paediatr Indones. 1972;12(1):40-48. model for the transmission of dengue fever
disease. Bull Malays Math Sc Soc. (Second
[5] Porter KR, Beckett CG, Kosasih H, Tan Series) 2001;24:49-57.
RI, Alisjahbana B, Rudiman PI, Widjaja S,
Listiyaningsih E, Ma’Roef CN, McArdle JL, [11] C l a r k e T. B r e a k b o n e f e v e r. N a t u r e .
Parwati I, Sudjana P, Jusuf H, Yuwono D, 2002;416:672.
Wuryadi S. Epidemiology of dengue and
dengue hemorrhagic fever in a cohort of adults [12] Kinney RM, Huang CY. Development of
living in Bandung, West Java, Indonesia. Am J new vaccines against dengue fever and
Trop Med Hyg. 2005;72(1):60-66. Jap ane se e nc e p h al itis. I nter virolog y.
2001;44:176-191.
[6] Kusriastuti R, Sutomo S. Evolution of dengue
prevention and control programme in [13] Konishi E, Kosugi S, Imoto J. Dengue tetravalent
Indonesia. Dengue Bulletin. 2005;29:1-6. DNA vaccine inducing neutralizing antibody
and anamnestic responses to four serotypes in
mice. Vaccine. 2006;24(12):2200-2207.
[14] Soewono E, Supriatna AK. Paradox of [25] Corwin AL, Larasati RP, Bangs MJ, Wuryadi
vaccination predicted by a simple dengue S, Arjoso S, Sukri N, Listyaningsih E, Hartati
disease model. In: M.C. Joshi et al. Eds. S, Namursa R, Anwar Z, Chandra S, Loho B,
Industrial Mathematics. New Delhi: Narosa, Ahmad H, Campbell JR, Porter KR, Epidemic
2006. p. 459. dengue transmission in southern Sumatra,
Indonesia. Trans R Soc Trop Med Hyg.
[15] Nuraini N. Mathematical models for external 2001;95:257.
and internal dengue disease transmission.
Ph.D. Dissertation, ITB Bandung – Indonesia [26] Suwandono A, Kosasih H, Nurhayati,
(unpublished, in Indonesian), 2008. Kusriastuti R, Harun S, Ma’roef C, Wuryadi
S, Herianto B, Yuwono D, Porter KR, Beckett
[16] Supriatna AK, Nuraini N, Soewono E. CG, Blair PJ. Four dengue virus serotypes found
Mathematical models of dengue transmission circulating during an outbreak of dengue fever
and control: a survey. In: Basak Ganim and and dengue haemorrhagic fever in Jakarta,
Adam Reis (eds.), Dengue Virus: Detection, Indonesia, during 2004. Trans R Soc Trop Med
Diagnosis and Control. New York: Nova Hyg. 2006;100(9):855-62.
Science Publishers. (in press).
[27] Ooi EE, Goh KT, Gubler DJ, Dengue prevention
[17] Supriatna AK, Soewono E, van Gils SA. A two- and 35 years of vector control in Singapore.
age-classes dengue transmission model. Math Emerg Infect Dis. 2006;12:887.
Biosci. 2008;216:114-121.
[28] Patumamond J, Tawichasri C, Nopparat S,
[18] Anderson RM, May RM. Infectious diseases Dengue hemorrhagic fever in Uttaradict,
of humans. Oxford: Oxford University Press Thailand. Emerg Infect Dis. 2003;9:1348.
1991.
[29] Rubiana I. Age-structured model of dengue
[19] Diekmann O, Heesterbeek JAP, Mathematical patients in Bandung during 2002-2007 dengue
epidemiology of infectious diseases. New York: outbreaks. S1 Thesis, Dept. Mathematics,
John Wiley and Sons, 2000. University Padjadjaran 2008 (unpublished, in
[20] Nishiura H. Mathematical and statistical Indonesian).
analyses of the spread of dengue. Dengue [30] Halstead SB. Dengue. In: Tropical and
Bulletin. 2006;30:51-67. geographical medicine. Warren KS, Mahmoud
[21] Brauer F. A model for an SI disease in an age- AAF. Eds. New York: McGraw-Hill, 1990. p.
structured population. Disc Cont Dyn Sys-Ser 675-684.
B. 2002;2:257-264. [31] Marques CA, Forattini 0P, Massad E. The basic
[22] Scherer A, McLean A. Mathematical model reproduction number for dengue fever in Sao
of vaccination. British Medical Bulletin. Paulo state, Brazil: 1990- 1991 epidemic. Trans
2002;62:187-199. R Soc Trop Med Hyg. 1994;88:58-59.
[23] Supriatna AK, Soewono E. Analysis of an [32] Maciel-de-Freita R, Codeco CT, Lourenco-de-
SIR dengue transmission model with age- Oliveira R. Body size-associated survival and
dependent survival rates (in prep.) dispersal rates of Aedes aegypti in Rio de Janeiro.
Med Vet Entomol. 2007;21:284-292.
[24] Roberts MG, Heesterbeek JAP, A new method
for estimating the effort required to control [33] Kuno G. Review of the factors modulating
an infectious disease. Proc Roy Soc Lond. dengue transmission. Epidemiological Review.
2003;B270:1359. 1995;17:321-335 .