Serratia marcescens

Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
Chr - - CP029449.1 5.54 58.9 5,067 22 87 15 5,341 150
Plsm pCAV1761-205 - CP029448.1 0.2 51.5 202 - - - 232 30
Plsm pCAV1761-3223 - CP029444.1 0 56.3 4 - - - 6 2
Plsm pCAV1761-6393 - CP029445.1 0.01 52.7 6 - - - 8 2
Plsm pCAV1761-73 - CP029447.1 0.07 53.4 87 - - - 90 3
Plsm pKPC_CAV1761 - CP029446.1 0.07 49.2 76 - - - 86 10

Densidad de genes: cantidad de genes

LOCUS CP029449 5540160 bp DNA circular BCT 22-MAY-2018

DEFINITION Serratia marcescens strain CAV1761 chromosome, complete genome.

complete rRNAs :: 8, 7, 7 (5S, 16S, 23S)

gene complement(2663197..2664012)
/locus_tag="DKC05_14990"
CDS complement(2663197..2664012)
/locus_tag="DKC05_14990"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012004510.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="Cof-type HAD-IIB family hydrolase"
/protein_id="AWL68855.1"
/translation="MAIELIAIDMDGTLLDPQHQITPAVKQAIAAARRKGVHVVLATG
RPYVGVQDYLRQLDIQGPGDFCITYNGALVLRAVDGACILQETLGFEDYLHFEQMARE
LGVHYQAFDFDTLYTPNKDIGKYTIHEAEMTGIPLKYRSVEEMDRQMRFPKVMMIDEP
ELLDRAIARIPSETRERYTILKSAPYFLEILHKNVDKGAGVRMLAEHLGVARENIMTL
GDQANDTAMIEYAGVGVAMGNAIPELKAVAQFVTGANTEDGVARAIEKFVLNG"
gene complement(2664137..2666551)
/gene="gyrB"
/locus_tag="DKC05_14995"
CDS complement(2664137..2666551)
/gene="gyrB"
/locus_tag="DKC05_14995"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005121480.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
/protein_id="AWL68856.1"
/translation="MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVV
DNAIDEALAGHCSDIQVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGG
KFDDNSYKVSGGLHGVGVSVVNALSEKLELVIRREGKVHEQTYSHGEPQAPLNVVGET
EQTGTMVRFWPSHQTFTNVTEFEYDILAKRLRELSFLNSGVSIRLQDKRTDREDHFHY
EGGIKAFVEYLNKNKTPIHPNVFYFSTVKDDIGVEVALQWNDGFQENIYCFTNNIPQR
DGGTHLVGFRTAMTRTLNSYMEKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSS
QTKDKLVSSEVKTAVETLMNEKLVDYLMENPGDAKIVVGKIIDAARAREAARKAREMT
RRKGALDLAGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKI
LNVEKARFDKMLSSQEVATLITALGCGIGRDEYSPDKLRYHSIIIMTDADVDGSHIRT
LLLTFFYRQMPEIIERGHVFIAQPPLYKVKKGKQEQYIKDDEAMDQYQIAIAMDGATL
HTNASAPALGGEQLEKLVAEHYGVQKLIGRMERRYPRALLNSLIYQPTLNEGDLSDEA
KVKTWIASLVQALNDKEQHGSSYDFVIFENRERQMFEPALRIRTHGVDTDYKLDFDFI
HGGEYRKICQLGEKLRGLIEDGAFIERGERRQPVDSFEQALEWLVKESRRGLSVQRYK
GLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTLMGDAVEPRRAFIEENALK
AANIDI"
gene complement(2666570..2667655)
 /locus_tag="DKC05_15000"
CDS complement(2666570..2667655)
/locus_tag="DKC05_15000"
/inference="COORDINATES: similar to AA
sequence:RefSeq:YP_002348947.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DNA replication/repair protein RecF"
/protein_id="AWL68857.1"
/translation="MALTRLLIKDFRNIEAADLALAPGFNFLVGANGSGKTSVLEAVY
TLGHGRAFRSLQAGRVIRHDQPEFVLHGRIEGTERELSVGLSKSRQGDSKVRIDGSDG
HKVAELAQLLPMQLITPEGFTLLNGGPKFRRAFLDWGCFHNEPGFFTAWSNLKRLLKQ
RNAALRQVSRYAQIRAWDQELIPLAERISEWRAEYSDAIAADITATCAQFLPEFALSF
SFQRGWDKESDYGELLERQFERDRALTYTAVGPHKADFRIRADGTPVEDLLSRGQLKL
LMCALRLAQGEFLTRQSGRRCLYLIDDFASELDTGRRRLLADRLKATQAQVFVSAVSA
EQVTDMAGEKGKMFRVEQGKIEVQPQD"
gene complement(2667683..2667811)
/locus_tag="DKC05_15005"
CDS complement(2667683..2667811)
/locus_tag="DKC05_15005"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001148015.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="L-asparaginase"
/protein_id="AWL71484.1"
/translation="MRAILLAILRLGSARNPHVLCVRSGCCALSARKLPAPITPLQ"
gene complement(2667817..2668917)
/locus_tag="DKC05_15010"
CDS complement(2667817..2668917)
/locus_tag="DKC05_15010"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005976672.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit beta"
/protein_id="AWL68858.1"
/translation="MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGCLLL
TGTDLEMEMVARVALSQPHEPGATTVPARKFFDICRGLPEGAEIAVTLESERMLVRSG
RSRFSLSTLPAADFPNLDDWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMLF
ETEGEELRTVATDGHRLAVCSMPIGQQLPSHSVIVPRKGVMELVRLLDGGDSLLQLQI
 GSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKTLEAGCDLLKQAFARAAILSNE
KFRGVRLYVSQNQLKITANNPEQEEAEEILDVSYDGAEMEIGFNVSYVLDVLNALKCE
DVRLLLTDSVSSVQIEDGASQAAAYVVMPMRL"
gene complement(2668922..2670316)
/locus_tag="DKC05_15015"
CDS complement(2668922..2670316)
/locus_tag="DKC05_15015"
/inference="COORDINATES: similar to AA
sequence:RefSeq:YP_002348949.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="chromosomal replication initiator protein DnaA"
/protein_id="AWL68859.1"
/translation="MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPN
RFVLDWVRDKYLNNINGLLNDFCGTDAPLLRFEVGSKPITQVISQTVAASVSSAPAAP
AARTAAPLRPSWDNAAAQPELSYRSNVNPKHTFDNFVEGKSNQLARAAARQVADNPGG
AYNPLFLYGGTGLGKTHLLHAVGNGIMARKANAKVVYMHSERFVQDMVKALQNNAIEE
FKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVE
DRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELE
GALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLL
SKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREESHD
IKEDFSNLIRTLSS"
gene 2670999..2671139
/gene="rpmH"
/locus_tag="DKC05_15020"
CDS 2670999..2671139
/gene="rpmH"
/locus_tag="DKC05_15020"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001686914.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L34"
/protein_id="AWL68860.1"
/translation="MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTV
SK"