Make sure you've saved any changes to the input file before starting!

Select EXECUTE to begin.

================================================================================

EGSnrc version 4 for win3232 02/24/19 11:41:59

================================================================================

configuration...............................................win3232

user code...................................................dosxyznrc

pegs file...................................................700icru on HEN_HOUSE

using host..................................................PITRI

input file..................................................belajar1DOSXYZnrc

output file(s)..............................................belajar1DOSXYZnrc

================================================================================

Begin execution with large arrays being zeroed

Thisis only needed for Linux g77 compiler - comment

this code near the top of dosxyznrc.mortran if you are

not using a linux g77 compiler

*******************************************************************************

NRCC/UW EGSnrc user-code DOSXYZnrc

ON win3232 :41:59 4/19 11

*******************************************************************************

** **

** DOSXYZnrc **

** Z pronounced zed **

** **

** Code developed at the National Research Council of Canada and **

** University of Wisconsin as part of the OMEGA project **

** **

** **

** **

*******************************************************************************

The following parameters may be adjusted in dosxyz_user_macros.mortran

$MXMED: Max number of media: 7

$MXSTACK: Max stack size: 10000

$IMAX,etc: Max dose scoring regions in x,y,z directions: 128 128 128

$MAXDOSE: Max dose scoring regions consistent with above:2097153

$DOSEZERO(=1) 1=> all doses with uncert > 50% are zeroed in .3ddose file

The following parameters may be adjusted in srcxyz.macros

$INVDIM: number of elements in inverse CPD for input energy spectra = 1000

$NENSRC: number of bins in input energy spectrum = 200

===============================================================================

-------------------------------------------------------------------------------

Title: belajar1DOSXYZnrc

-------------------------------------------------------------------------------

===============================================================================

Number of media (min = 1, max = 7, 0 => CT data): 1

Medium 1: H2O700ICRU
ECUTIN,PCUTIN,(ESTEPE,SMAX--DUMMY INPUTS):

0.521 0.010 0.000 0.000

# regions in x (max= 128),y (max= 128),z (max= 128) directions

(if<0,implies # groups of reg), IPHANT (1 to output a .egsphant

file for dosxyz_show, 0[default] to not output this file)

: 3 3 -2 1

Will output a .egsphant file to display isodose contours

with dosxyz_show.

Input boundaries in the x-direction

-----------------------------------

Small boundary for region( 1) -20.000

Small boundary for region( 2) -0.500

Small boundary for region( 3) 0.500

Outer boundary for region( 3) 20.000

Input boundaries in the y-direction

-----------------------------------

Small boundary for region( 1) -20.000

Small boundary for region( 2) -0.500

Small boundary for region( 3) 0.500

Outer boundary for region( 3) 20.000

Input boundaries in the z-direction

-----------------------------------

Initial boundary: 0.000

Width in this group, number of regions in group: 0.200 20

Width in this group, number of regions in group: 1.000 36

Boundaries

0.000 0.200 0.400 0.600 0.800 1.000

1.200 1.400 1.600 1.800 2.000 2.200

2.400 2.600 2.800 3.000 3.200 3.400

3.600 3.800 4.000 5.000 6.000 7.000

8.000 9.000 10.000 11.000 12.000 13.000

14.000 15.000 16.000 17.000 18.000 19.000

20.000 21.000 22.000 23.000 24.000 25.000

26.000 27.000 28.000 29.000 30.000 31.000

32.000 33.000 34.000 35.000 36.000 37.000

38.000 39.000 40.000

Total # regions including exterior = 505

Input groups of regions for which density and medium are not defaults

Lower,upper i, j, k, MEDIUM, DENSITY ( 1 3)( 1 3)( 1 56) 1 1.000

Lower,upper i, j, k, MEDIUM, DENSITY

Found blank line => end of this input

Input groups of regions for which ECUT and PCUT are not defaults

NB This option is disabled, just input 8 zeros.

Dummy values of lower,upper i, j, k, ECUT, PCUT

Found blank line => end of this input

Enter 8 numbers on one line

3 pairs defininglower,upper x,y,z indicies of dose regions

for which results are to be output

IZSCAN: non-zero for z-scan/page

MAX20: if any one = 1, output summary of max 20 doses.

end signaled by first pair both zero

forno dose printed, MAX20 is still read from first line

1 3 1 3 1 56 1 1

Found blank line => end of this input

Source configuration

(0) Parallel, rectangular beam incident from the front

Requires 9 inputs:

charge (-1,0,1),

0 (mandatory, to identify source type),

lower x-coordinate of the beam (cm),

upper x-coordinate of the beam (cm),

lower y-coordinate of the beam (cm),

upper y-coordinate of the beam (cm),

angle of beam with respect to the positive x-axis (degrees),

angle of beam with respect to the positive y-axis (degrees),

angle of beam with respect to the negative z-axis (degrees)

(angles default to 90,90,0--incident on front of phantom)

or (1) Parallel, rectangular beam incident from any direction

 Requires 10 inputs:

charge (-1,0,1),

1 (mandatory, to identify source type),

x-coordinate of the isocenter (cm),

y-coordinate of the isocenter (cm),

z-coordinate of the isocenter (cm),

angle between +z direction and the line joining the

center of the beam (collimator) to the isocenter

--called the polar angle(degrees),

angle between +x direction and the projection of the

line joining the center of the beam (collimator)

to the isocenter on the xy plane--called the azimuthal

angle (degrees),

total x-widthof the beam in the plane perpendicular

to the beam direction (cm),

total y-width of the beam in the plane perpendicular

to the beam direction (cm),

angle by which the collimator is rotated in the

collimator plane perpendicular to the beam

direction (degrees),

(+ve rotation is counterclockwise looking along

the beam direction

or (2) Full phase-space of each particle

Requires 9 inputs plus data stored in units 43 and 44:

charge (-1 electron,0 photon,1 positron, 2 all),

2 (mandatory, to identify source type),

x-coordinateof the isocenter (cm),

y-coordinate of the isocenter (cm),

 z-coordinate of the isocenter (cm),

angle between +z direction and the line joining the

origin in the phase space plane to the isocenter

--called the polar angle(degrees),

angle between +x direction and the projection of the

line joining the origin in the phase space plane

tothe isocenter on the xy plane--called the azimuthal

angle (degrees),

absolute distance from the isocenter to the origin

in the phase space plane

angle by which the source is rotated in the

phase space plane perpendicular to the beam

direction (degrees),

(+ve rotation is counterclockwise looking down

from the origin in the phase space plane),

i_dbs--set to 1 if DBS was used in BEAM simulation used

to generate the phsp source and you want to reject fat

photons, 0 otherwise,

DBS splitting radius (cm),

SSD at which splitting radius defined (cm),

Z at which phsp source collected (cm),

No. of times to split charged particles.

or (3) Point, rectangular beam incident from the front

Requires 7 inputs:

charge (-1,0,1),

3 (mandatory, to identify source type),

lower x-coordinate of the beam (cm),

upper x-coordinate of the beam (cm),

 lower y-coordinate of the beam (cm),

upper y-coordinate of the beam (cm),

distance to the plane (cm),

or (6) Uniform isotropically radiating parallelepiped within

the phantom

Requires 8 inputs:

charge (-1,0,1),

6 (mandatory, to identify source type),

lower x-coordinate of active volume (cm)

upper x-coordinate of active volume (cm),

lower y-coordinate of active volume (cm)

upper y-coordinate of active volume (cm),

lower z-coordinate of active volume (cm)

upper z-coordinate of active volume (cm)

or (7) Parallel beam incident from multiple, user-selected angles

Requires 9 inputs on this line:

charge (-1,0,1),

7 (mandatory, to identify source type),

x-coordinate of the isocenter (cm),

y-coordinate of the isocenter (cm),

z-coordinate of the isocenter (cm),

number of incident theta-phi pairs or -ve number of

groups of incident theta-phi pairs where, within a group

only theta or phi can vary, the varying angles are

evenly distributed and have equal probability,

total x-width of the beam in the plane perpendicular

to the beamdirection (cm),

 total y-width of the beam in the plane perpendicular

to the beam direction (cm),

angle by which the collimator is rotated in the

collimator plane perpendicular to the beam

direction (degrees),

(+ve rotation is counterclockwise looking along

thebeam direction

or (8) Full phase-space incident from multiple angles

Requires 8 inputs on this line and data stored in units 43,44:

charge (-1 electron,0 photon,1 positron, 2all),

2 (mandatory, to identify source type),

x-coordinate of the isocenter (cm),

y-coordinate of the isocenter (cm),

z-coordinate of the isocenter (cm),

number of incident theta-phi pairs or -ve number of

groups of incident theta-phi pairs where, within a group

only theta or phi can vary, the varying angles are

evenly distributed and have equal probability,

absolute distance from the isocenter to the origin

in the phase space plane

angle by which the source is rotated in the

phase space plane perpendicular to the beam

direction (degrees),

(+ve rotation is counterclockwise looking down

from the origin in the phase space plane),

i_dbs--set to 1 if DBS was used in BEAM simulation used

to generate the phsp source and you want to reject fat

photons, 0 otherwise,
 DBS splitting radius (cm),

SSD at which splitting radius defined(cm),

Z at which phsp source collected (cm)

No. of times to split charged particles.

or (9) BEAM simulation of treatment head

Requires 11 inputs plus name of accelerator simulation,

input file used in accelerator simulation, and pegs4

data used in accelerator simulation:

charge (-1 electron,0 photon,1 positron, 2 all),

9 (mandatory, to identify source type),

x-coordinate of the isocenter (cm),

y-coordinate of the isocenter (cm),

z-coordinate of the isocenter (cm),

angle between beam central axis and +z axis in DOSXYZ

geometry--called the polar angle(degrees),

angle between +x direction in DOSXYZ geometry and

beam central axis projected on the DOSXYZ xy plane

--called the azimuthal angle (degrees),

absolute distance from the isocenter to centre of

scoring plane in BEAM simulation,

angle to rotate BEAM simulation about its central

axis (degrees) (+ve rotation is counterclockwise

looking down the axis),

i_dbs--set to 1 if DBS is being used in BEAM simulation

and you want to reject fat photons, 0 otherwise,

No. of times to split charged particles.

or (10) BEAM simulation source incident from multiple angles

 Requires 10 inputs plus name of accelerator simulation,

input file used in accelerator simulation,and pegs4

data used in accelerator simulation:

charge (-1 electron,0 photon,1 positron, 2 all),

9 (mandatory, to identify source type),

x-coordinate of the isocenter (cm),

y-coordinate of the isocenter (cm),

z-coordinate of the isocenter (cm),

number of incident theta-phi pairs or -ve number of

groups of incident theta-phi pairs where, within a group

only theta or phi can vary, the varying angles are

evenly distributed and have equal probability,

absolute distance from the isocenter to centre of

scoring plane in BEAM simulation,

angle to rotate BEAM simulation about its central

axis (degrees) (+ve rotation is counterclockwise

looking down the axis),

i_dbs--set to 1 if DBS is being used in BEAM simulation

and you want to reject fat photons, 0 otherwise,

No. of times to splitcharged particles.

or (20) Phase Space Incident from multiple settings

optionally through an MLC or through a BEAM accel.

Requires 6 inputs plus name of the input file used

forBEAM/vcu SIM. and the BEAM/VCU code if used

data used in simulation:

charge (-1 electron,0 photon,1 positron, 2 all),

20 (mandatory, to identify source type),

number of control points,

 i_dbs: set to 1 if DBS is being used in simulation

and you want to reject fat photons, 0 otherwise,

r_dbs: radius of DBS splitting field in original

BEAM simulation,

ssd_dbs: SSD of DBS splitting field,

z_dbs: Z position where phase space was scored

in original BEAM simulation,

No. of times to splitcharged particles,

i_muidx_out: Set to 1 to include fractional MU index

in output phase space (i_phsp_out=1 or 2)

calflag: Set to 1 to skip the calibrationrun performed

to refine the estimate of NRCYCL.

or (21) BEAM simulation of treatment head will multiple settings

optionally through a MLC

Requires name of accelerator simulation,

input file used in accelerator simulation, and pegs4

data used in accelerator simulation, name of input file

for vcu SIM. and the VCU code (particleDmlc) if using MLC

charge (-1 electron,0 photon,1 positron, 2 all),

21 (mandatory, to identify source type),

number of control points

i_dbs: set to 1 if DBS is being used in BEAM simulation

and you want to reject fat photons, 0 otherwise,

No. of times to split charged particles.

i_muidx_out: Set to 1 to include fractional MU index

in output phase space (i_phsp_out=1 or 2)

All inputs on one line:

Parallel beam incident from an arbitrary direction

Electric charge of the source: 0

x-coordinateof the isocenter: 0.0000

y-coordinate of the isocenter: 0.0000

z-coordinate of the isocenter: 0.0000

Polar angle of collimator center: 180.0000

Azimuthal angleof collimator center: 90.0000

Total x-collimator width: 15.0000

Total y-collimator width: 15.0000

Collimator rotation angle: 0.0000

Enflag(0=mono-E,1=spectr,2=phsp or full BEAM sim.,3=dosecomp,4=beam model),

Mode(0,2), medsur(0 = vacuum), dsurround(1), dflag(0=1 dsurround,

1=4 dsurrounds), dsurround(2), dsurround(3), dsurround(4)

: 0 0 0 0.000 0

Beam Energy (K.E. in MeV): 6.000

NCASE,IWATCH,TIMMAX,INSEED1,INSEED2,BEAM_SIZE,ISMOOTH,IRESTART,IDAT,

IREJECT,ESAVE_GLOBAL,NRCYCL,IPARALLEL,PARNUM,n_split,ihowfarless,i_phsp_out

300000000 0 100.00 33 97 100.00 0 0 0 0 0.00 0 0 0 1 0 0

***************** Warning:

File C:\EGSnrc-
master\EGS_HOME\dosxyznrc\egsrun_2712_belajar1DOSXYZnrc_PITRI\belajar1DOSXYZnrc.errors

is already opened and connected to unit 15

Will not try to re-open this file, assuming it has been opened

by specifying it in the .io file.

Bound Compton start region

Setting all to 0

Rayleigh start region

Setting all to 0

Relaxations start region

Setting all to 0

PE sampling start region

Setting all to 0

****WARNING****

ECUTIN > ECUT input in EGSnrc parameters ( 0.5210 MeV).

ECUT defaults to ECUTIN.

Call hatch

----------

===> Photonuclear flag: 0

Rayleigh data available for medium 1 in PEGS4 data set.

(Re)-initializing photon cross sections with files from the series: xcom

Compton cross sections: default

Using Compton cross sections from C:\EGSnrc-master\HEN_HOUSE\data\compton_sigma.data

Working on medium 1 ... OK

old PRESTA calculates default min. step-size for BCA:

minimum ECUT found: 0.69999999999999996

default BLCMIN is: 5.8014179019499741

this corresponds to 330.76822448140649 elastic MFPs

Reading screened Rutherford MS data ............... done

Reading spin data base from C:\EGSnrc-master\HEN_HOUSE\data\spinms.data

EGSnrc spin data, version 2.0

Data generated on a machine with 1234 endianess

The endianess of this CPU is 1234

Ranges: 1.00 100.00 0.30054 1.00000

medium 1 ..................... done

Medium 1 sige = 0.43643562363412514 0.42997804778658855 monotone = T T

Initializing tmxs for estepe = 0.25000000000000000 and ximax = 0.50000000000000000

Output from subroutine EDGSET:

==============================

Atomic relaxations not requested!

Bound Compton scattering not requested!

EGSnrc SUCCESSFULLY 'HATCHED' FOR ONE MEDIUM.

================================================================================

Electron/Photon transport parameter

================================================================================

Photon cross sections xcom

Compton cross sections default

Photon transport cutoff(MeV) 0.1000E-01

Pair angular sampling SIM

Pair cross sections BH

Triplet production Off

Bound Compton scattering OFF

Radiative Compton corrections Off

Rayleigh scattering OFF

Atomic relaxations OFF

Photoelectron angular sampling OFF

Electron transport cutoff(MeV) 0.7000

Bremsstrahlung cross sections BH

Bremsstrahlung angular sampling SIM

Spin effects On

Electron Impact Ionization Off

Maxium electron step in cm (SMAX) 5.000

Maximum fractional energy loss/step (ESTEPE) 0.2500

Maximum 1st elastic moment/step (XIMAX) 0.5000

Boundary crossing algorithm PRESTA-I

Skin-depth for boundary crossing (MFP) 330.8

Electron-step algorithm PRESTA-II

================================================================================

Starting a new calculation

Store intermediate files for each batch

*******************************************************************************

Summary of source parameters (srcxyznrc)

*******************************************************************************

Parallel beam incident from an arbitrary direction

Electric charge of the source: 0

x-coordinate of the isocenter, 0.0000 cm

y-coordinate of the isocenter, 0.0000 cm

z-coordinate of the isocenter, 0.0000 cm

Polar angle of collimator center: 180.0000 degrees

Azimuthal angle of collimator center: 90.0000 degrees

Total x-width of collimator, 15.0000 cm

Total y-width of collimator, 15.0000 cm

Collimator rotation angle, 0.0000 degrees

Medium AE AP

H2O700ICRU 0.700 0.010

No range rejection.

***************************************************************

Histories to be simulated for this run 300000000

Histories to be analyzed after this run 300000000

***************************************************************

Elapsed wall clock time to this point= 1.057 s

CPU time so far for this run = 0.516 s

BATCH # TIME-ELAPSED TOTAL CPUTIME RATIO TIME OF DAY RNG pointers

1 0.0 0.0 0.00 :42:00 ixx jxx = 97 33

2 1771.0 1758.3 1.01 :11:31 ixx jxx = 27 60

3 3486.7 3471.7 1.00 :40:07 ixx jxx = 48 81

4 5202.0 5184.9 1.00 :08:42 ixx jxx = 4 37

5 6917.7 6898.2 1.00 :37:18 ixx jxx = 17 50

6 8634.7 8612.6 1.00 :05:55 ixx jxx = 33 66

7 12440.3 10463.3 1.19 :09:21 ixx jxx = 17 50

8 14226.8 12241.4 1.16 :39:07 ixx jxx = 3 36

 9 16036.9 14033.6 1.14 :09:17 ixx jxx = 33 66

10 17846.8 15836.3 1.13 :39:27 ixx jxx = 63 96

Total CPU time for run = 17569.1 s = 4.880 hr => 61471527. hist/hr

On win3232

********************************************************************

# of particles which missed the phantom with source 1 = 0

********************************************************************

Fraction of incident energy deposited in the phantom = 0.5317

Number of charged particle steps simulated, N_step = 6179114859

Number of charged particle steps/incident fluence = 4.63434E+03

No. of PRESTA-II steps/total no. of charged particle steps = 0.68351

Sets of depths per page = 0

Set to = 1

average of 20 highest doses = 0.16429E-10 Gy/particle

average % error of 20 highest doses = 0.420 %

average % error of doses > 0.500 of max dose = 0.423 %

(average error of doses > 0.500 of max dose)/(max dose) = 0.332 %

quadrature average % error of doses > 0.500 of max dose = 0.428 %

There are 47 voxelswith dose > 0.500 of max dose

20 highest doses:

dose (Gy/particle) (x,y,z) (cm)

----------------- ------------

0.17287E-10 +/- 0.46411 % ( 0.00000, 0.00000, 2.70000 )

0.17220E-10 +/- 0.46467 % ( 0.00000, 0.00000, 2.50000 )

0.17214E-10 +/- 0.46593 % ( 0.00000, 0.00000, 3.30000 )

0.17207E-10 +/- 0.46381 % ( 0.00000, 0.00000, 2.90000 )

0.17174E-10 +/- 0.46419 % ( 0.00000, 0.00000, 3.10000 )

0.17116E-10 +/- 0.46727 % ( 0.00000, 0.00000, 3.70000 )

0.17088E-10 +/- 0.46554 % ( 0.00000, 0.00000, 3.50000 )

0.17033E-10 +/- 0.46595 % ( 0.00000, 0.00000, 2.30000 )

0.16850E-10 +/- 0.46734 % ( 0.00000, 0.00000, 3.90000 )

0.16838E-10 +/- 0.33558 % ( 0.00000, 0.00000, 4.50000 )

0.16663E-10 +/- 0.47187 % ( 0.00000, 0.00000, 2.10000 )

0.16613E-10 +/- 0.33769 % ( 0.00000, 0.00000, 5.50000 )

0.16250E-10 +/- 0.34036 % ( 0.00000, 0.00000, 6.50000 )

0.16018E-10 +/- 0.34268 % ( 0.00000, 0.00000, 7.50000 )

0.15971E-10 +/- 0.48039 % ( 0.00000, 0.00000, 1.90000 )

0.15699E-10 +/- 0.34584 % ( 0.00000, 0.00000, 8.50000 )

0.15364E-10 +/- 0.34873 % ( 0.00000, 0.00000, 9.50000 )

0.15077E-10 +/- 0.35191 % ( 0.00000, 0.00000, 10.50000 )

0.14999E-10 +/- 0.49313 % ( 0.00000, 0.00000, 1.70000 )

0.14902E-10 +/- 0.35415 % ( 0.00000, 0.00000, 11.50000 )

Total CPU time for this run = 17569.7 s = 4.880 hr

END OF RUN 4/19 17 :08:27

================================================================================

Finished simulation

Elapsed time: 19588.2 s ( 5.441 h)

CPU time: 17569.7 s ( 4.880 h)

Ratio: 1.115

End of run 02/24/19 17:08:27

================================================================================

C:\EGSnrc-
master\EGS_HOME\dosxyznrc\egsrun_2712_belajar1DOSXYZnrc_PITRI\belajar1DOSXYZnrc.3ddose

C:\EGSnrc-
master\EGS_HOME\dosxyznrc\egsrun_2712_belajar1DOSXYZnrc_PITRI\belajar1DOSXYZnrc.egsdat

C:\EGSnrc-
master\EGS_HOME\dosxyznrc\egsrun_2712_belajar1DOSXYZnrc_PITRI\belajar1DOSXYZnrc.egslst

C:\EGSnrc-
master\EGS_HOME\dosxyznrc\egsrun_2712_belajar1DOSXYZnrc_PITRI\belajar1DOSXYZnrc.egsphant

C:\EGSnrc-
master\EGS_HOME\dosxyznrc\egsrun_2712_belajar1DOSXYZnrc_PITRI\belajar1DOSXYZnrc.errors

C:\EGSnrc-
master\EGS_HOME\dosxyznrc\egsrun_2712_belajar1DOSXYZnrc_PITRI\egsrun_2712_belajar1DOSXYZnr
c_PITRI_junk

6 file(s) moved.