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Authors Shuting Yang 1, 2*, Chuan Chen 1*, Yunpeng Zhao 1, Wang Xi 1, Xiaolong Zhou 3, Binlong Chen 3, Chengxin Fu 2
1
Affiliations The Key Laboratory of Conservation Biology for Endangered Wildlife of the Ministry of Education,
College of Life Sciences, Zhejiang University, Hangzhou, P. R. China
2
Laboratory of Systematic & Evolutionary Botany and Biodiversity, Institute of Plant Sciences
and Conservation Center for Gene Resources of Endangered Wildlife, Zhejiang University, Hangzhou, P. R. China
3
Panʼan Institute of Chinese Materia Medica, Panʼan, P. R. China
tory of more than one thousand years. Although a practice. The present results will also facilitate
l
" genetic diversity
l
" ISSR fingerprinting number of studies have focused on either chemi- our theoretical understanding of the selective
l
" HPLC fingerprinting cal or genetic variation, none have dealt with and adaptive evolutionary processes of medicinal
their association to discuss the formation of plant species impacted by domestication and a
chemical diversity. We applied HPLC fingerprint- changing environment.
ing with identification of four predominant bioac-
tive compounds using LC‑ESI‑MS to assess chemi-
cal variation among 6 cultivated and 5 wild popu- Abbreviations
lations of S. ningpoensis. Significant chemical dif- !
ferences were revealed between wild and culti- FST: genetic differentiation estimated by
received April 30, 2010 vated populations in terms of chromatographic ANOVA
revised October 4, 2010 profiles, principal component analysis (PCA) ΦST: inter-population genetic differentia-
accepted Nov. 11, 2010 plots, and bioactive compounds contents. Com- tion estimated by AMOVA
pared to cultivated populations, the chemical pro- ΦCT: among-group genetic differentiation
Bibliography
DOI http://dx.doi.org/ files varied considerably among wild populations, estimated by AMOVA
10.1055/s-0030-1250601 of which some were remarkably similar to culti-
Published online vated populations. Inter simple sequence repeats Supporting information available online at
Planta Med © Georg Thieme
(ISSR) fingerprinting indicated a genetic differen- http://www.thieme-connect.de/ejournals/toc/
Verlag KG Stuttgart · New York ·
ISSN 0032‑0943 tiation pattern parallel to chemical variation. Evi- plantamedica
dence strongly supported the association be-
Correspondence
Dr. Yunpeng Zhao
Department of Biology
College of Life Sciences, Introduction plasticity with respect to compositional quality
Zhejiang University ! as well as responses to biotic and abiotic stresses
388 Yukangtang Road
Hangzhou 310058 Phytochemical diversity, on which the pharma- [1, 4]. Therefore, wild ancestors and landraces,
P. R. China ceutical quality of medicinal plants relies, results which are likely to bear higher genetic diversity,
Phone: + 86 5 71 88 20 64 63 from plasticity of plant secondary metabolism attract an increasing interest for their potential
Fax: + 86 5 71 86 43 22 73
ypzhao@zju.edu.cn which has evolved to respond to stresses and in- role in improving chemical composition and oth-
teractions with continuously changing environ- er traits in crop plants [4].
Correspondence ments [1]. Genetic diversity underlies the plas- Radix Scrophulariae, the root of Scrophularia
Prof. Chengxin Fu
Laboratory of Systematic ticity of secondary metabolism [2]. However, do- ningpoensis Hemsl. (Scrophulariaceae), is a fa-
and Evolutionary Botany mestication has led to an overall reduction of ge- mous Chinese traditional medicinal herb with a
Institute of Plant Sciences, netic diversity of crop plants, including medicinal domestication history of over 1000 years. Iridoids,
Zhejiang University
388 Yukangtang Road plants, despite increased productivity [3]. The like harpagoside, phenylpropanoid glycosides,
Hangzhou 310058 narrowing genetic variability may weaken crop like angroside C and acteoside, and cinnamic acid
P. R. China were revealed to be its main bioactive compo-
Phone: + 86 5 71 88 20 66 07
Fax: + 86 5 71 86 43 22 73 nents with anti-inflammatory, antimicrobial, and
cxfu@zju.edu.cn * These two authors contributed to this work equally. antitumor activities [5–9]. Several methods based
Table 1 Sample information of 16 populations of S. ningpoensis surveyed for ISSR variation and HPLC fingerprinting.
using sequence-related amplified polymorphism (SRAP) [19]. populations (TM and TW) were subjected to ISSR analyses due
Although studies have focused on either chemical or genetic to the material availability. All the materials were authenticated
analyses, no previous work has combined both sets of data to deal by Professor Chengxin Fu, and voucher specimens were depos-
with the association between the chemical and genetic variation ited at the Herbarium of Zhejiang University (HZU). Samples of
of S. ningpoensis. Therefore, in the present paper we aim (i) to es- Radix Scrophulariae were collected in December of 2006 from
timate the chemical variation pattern of wild and cultivated Rad- the same populations from which leaf materials were sampled
ix Scrophulariae from different regions in China using HPLC‑DAD (l" Table 1). The remaining wild materials were collected in No-
fingerprinting and LC‑ESI‑MS, (ii) to determine genetic diversity vember of 2009. All the sampled roots were gently washed and
and differentiation of these S. ningpoensis populations using ISSR dried at 50 °C followed by pulverization and 40-mesh sieving.
ration at 94 °C, 45 s annealing at 49.4–65 °C (depending on differ- samples produced four clustered groups in coincidence with cul-
ent primers), and 1.5 min elongation at 72 °C, as well as a final tivated populations (l " Fig. 2 b). We ran additional PCAs using the
elongation step of 10 min at 72 °C. Twelve primers (UBC primer four main bioactive compounds as variables, and the projections
set no. 9, Biotechnology Laboratory, University of British Colum- showed similar trends (see Fig. 2S in Supporting Information), in-
bia) were screened for fingerprinting all 100 individuals. The fol- dicating their potency as markers for quality assessment of Radix
lowing primers were used (annealing temperature in parenthe- Scrophulariae. The mean contents of the two compounds, angro-
ses): UBC809 (60.5 °C), UBC810 (53 °C), UBC811 (52.7 °C), side C and harpagoside, of wild populations were significantly
UBC812 (50.8 °C), UBC827 (60.5 °C), UBC834 (49.4 °C), UBC855 higher than those of cultivated ones (l " Table 2). Generally, one
(62 °C), UBC859 (57 °C), UBC874 (65 °C), UBC881 (60.5 °C), of the wild populations, TW, produced the highest contents of
UBC887 (50.8 °C), and UBC889 (50.8 °C). bioactive compounds. There were also significant differences of
angroside C and cinnamic acid contents among cultivated popu-
ISSR data analyses lations. Besides these two compounds, the wild populations
The following parameters of genetic diversity were calculated us- showed further difference of acetoside content, implying more
ing POPGENE version 1.31 [21]: (i) the percentage of polymorphic chemical variation among wild populations.
fragments (PPF); (ii) Neiʼs expected heterozygosity (HPOP); and
Table 2 Content comparison of the four bioactive compounds among different populations of S. ningpoensis (µg/mg).
Lowercases represent significant differences at the level of 95 % revealed by post hoc multiple comparison
levels of variance distributed among populations compared to l" Table 3; Table 1S in Supporting Information). Regarding the
wild populations (l " Table 4). currently unanalyzed wild populations of S. ningpoensis, our fur-
UPGMA clustering based on the genetic distance matrix resulted ther ITS-based maximum parsimony (MP) tree revealed a sub-
in two clades in the studied populations of S. ningpoensis, culti- stantial differentiation within population TM with one clade par-
vated and wild clades (l " Fig. 3). In the cultivated clade, popula- allel to clade AH and another relatively remote clade close to cul-
tion CQ was clearly separated from the other cultivated popula- tivated populations. Populations JX and HN considerably re-
tions, while all populations from Zhejiang (DP, RC, and YC) com- sembled all the cultivated populations in the ITS tree (C. Chen et
posed a close clade parallel to HB and SX populations. PCoA indi- al., unpublished manuscript). All the above genetic relationships
cated four main plots approximately consistent with UPGMA indicated by the ITS tree unexpectedly coincided with the chem-
clustering (see Fig. 3S in Supporting Information). ical differentiation represented in l " Fig. 2. The correlation be-
Table 4 Analysis of molecular variance (AMOVA) and Bayesian FST estimators for ISSR data of wild and cultivated S. ningpoensis.
ΦST: inter-population genetic differentiation; ΦCT: genetic differentiation among groups; θB: FST analogues under a free model of population sampling; GST‑B: Bayesian analogue of
Neiʼs GST; d. f.: degree of freedom
Acknowledgements 14 Zhu YF, Bi ZM, Liu CW, Ren MT, Wu FH, Li P. Endothelial cell extraction
! and HPLC‑ESI/TOF MS analysis for predicting potential bioactive com-
ponents of Radix Scrophulariae. J China Pharm Univ 2008; 39: 228–
This work was financially supported by the National Basic Re- 231
search Program of China (Grant No. 2007CB411600), the National 15 Bai ZC. Fingerprints of Radix Scrophulariae by HPLC. Chin Mater Med
Science & Technology Pillar Program during the Eleventh Five- 2006; 29: 1295–1299
Year Plan Period (Grant No. 2006BAI21B07), Zhejiang Provincial 16 Ma DF, Zhou N, Bai ZC, Fang LJ, Sun CJ. Identification of the habitat of
Radix Scrophulariae with chromatographic fingerprinting. Lishizhen
Natural Science Foundation of China (Grant No. Y3080087), and
Med Mater Med Res 2009; 20: 789–793
the Fundamental Research Funds for the Central Universities. 17 Zhao ZX, Liang ZS, Jiang ZM, Xue YF, Yang YZ. Establishment and optimi-
The authors are grateful to Pan Li for collecting part of wild pop- zation of ISSR reaction system for Scrophularia ningpoensis Hemsl.
ulations, the local producers for their kindness of facilitating Pharm Biotechnol 2007; 14: 318–323
sampling, and Xinhang Jiang and Dr. Zhican Wang for LC‑MS 18 Zhao ZX. The study on germplast resources diversity of Scrophularian
ningpoensis Hemsl. [dissertation]. Yangling: Northwest Agricultural
analysis. We also thank Dr. Yingxiong Qiu for his assistance in ge-
Forestry University; 2008
netic data analyses and crucial suggestions and Dr. Jimmy Trip- 19 Chen DX, Li LY, Peng R, Wu Y, Cai Y. Analysis of genetic difference among
lette for manuscript improvement. Scrophularia ningpoensis cultivars by SRAP. China J Chin Mater Med
2009; 34: 138–142
20 Doyle JJ. DNA protocols for plants – CTAB total DNA isolation. In: Hewitt
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