Documenti di Didattica
Documenti di Professioni
Documenti di Cultura
1998
Article No. jm980404
Barbini, R., Colao, F., Fantoni, R., Micheli, C., Palucci, A., and Ribezzo, S. 1998.
Design and application of a lidar fluorosensor system for remote monitoring of
phytoplankton. – ICES Journal of Marine Science, 55: 793–802.
Key words: algal quantum yield, laser remote sensing, phytoplankton monitoring.
1054–3139/98/040793+10 $30.00/0 ? 1998 International Council for the Exploration of the Sea
794 R. Barbini et al.
Table 1. Classification of the examined algal cultures. species we used medium F/2 (Guillard, 1975), with
modifications involving glycerophosphate (4.52 mg l "1)
Item Family Species instead of NaH2PO4, and an enhanced vitamin concen-
tration (B12 and Biotin 1.0 mg l "1), while the modified
Class Dinophyceae Erdschreiber medium (M. Parke, pers. comm.) was used
1 Prorocentraceae Prorocentrum micans for green algae and diatoms. The medium consists of
2 Prorocentraceae Prorocentrum minimum
3 Goniodomataceae Alexandrium tamarense natural sea water (Tyrrenian Sea) filtered (0.45 Ïm) and
4 Goniodomataceae Alexandrium lusitanicum sterilized at 121)C for 20 min. Then 0.1 g l "1 NaNO3,
Class Chlorophyceae 0.02 g l "1 Na2HPO4 12H2O · NaHCO3 and 0.2 g l "1
5 Clamydomonaceae Platymonas suecica NaHCO3 were added. Finally, 50 ml of soil extract
6 Polyblepharidaceae Dunaliella tertiolecta (50 g l"1) was added to the medium.
7 Clamydomonaceae Clamydomonas spp. Chlorophyll pigments (a, b, c1 +c2) were quantified,
Class Bacillarophyceae immediately after counting the cells, according to the
8 Phaeodactylinaceae Phaeodactylum tricornutum spectrophotometric equation originally proposed by
9 Nitzschiaceae Nitzschia closterium
JeVrey and Humphrey (1975). In this procedure, cell
10 Nitzschiaceae Nitzschia delicatissima
11 Fragilariaceae Fragilaria spp. suspensions were filtered (0.45 Ïm Millipore), treated
with acetone solution (90% for green algae and diatoms
Class Cyanophyceae
12 Chroococcaceae Synechococcus leopoliensis and 100% for dinoflagellates), and spun at 6000 rpm for
(Racib) Komarek 30 min.
13 Chroococcaceae Synechococcus 625
0
400 450 500 550 600 650 700 750 Results and discussion
Wavelength (nm)
Laser fluorimeter data
Figure 1. Gaussian deconvolution of a laboratory LIF spec-
trum obtained from a concentrated solution of Synecochoccus Prior to the campaign, diVerent algal cultures were
625. The assignment of the pigments is indicated and diVerent analysed in the laboratory in order to check the feasi-
integration bands are marked. bility of their remote field recognition. Band-integrated
spectral contents FÎ at four diVerent wavelengths,
Fig. 1 for a cyanophycean species containing several normalized to the total visible intensity Ftot, are
pigments, with the indication of the integration band for reported in Figure 3 for the algal groups listed in
each deconvoluted peak. LIF intensities were expressed Table 1.
in Raman units after normalization to the water Raman Because of the wide overlap between carotenoids and
intensity and calibrated with the diVerent pigment DOM emissions and also the non-negligible medium
contents. Spectral ratios were obtained to recognize contribution, the blue channel intensity F460 is seen not
various species from the integrated LIF intensities. to provide any unambiguous discrimination among dif-
ferent algal classes, while the red channels intensities
(F580, F660, and F680) appear more useful for this
Lidar fluorosensor purpose. Actually, the chlorophyll fluorescence intensity
Our former field and laboratory experience measuring F680 turns out to be highest for all the Dinophyceae
the photosynthetic activity of algae and higher plants species, lower for Chlorophyceae, and near the detection
led us to design a LIF apparatus with simplicity and limit for some of the investigated Bacillariophyceae
flexibility as its key characteristics. A novel laser source (Nitzschiaceae). Cyanophyceae species belonging to
has been designed specifically for the lidar, which is able the Chroococcaceae family, especially Synecochoccus
to transmit on the same optical line either a probe pulse 625, also show a relatively low Chl a content, although
alone or a pump pulse followed by a probe pulse with a they can be recognized by the typical phycoerythrin
properly selected delay (Barbini et al., 1995c). and phycocyanin emissions (F580 and F660, respect-
A coaxial arrangement was adopted between trans- ively), which do not occur in any of the other classes.
mitter and receiver, which are assembled on a common Red chlorophyll fluorescence intensity is related to the
chassis in order to minimize vibrationally induced Chl a content in each family, but the relationship does
optical mismatches (Fig. 2). The laser radiation excites depend on the species morphology and on the accessory
the fluorescent chloroplasts directly in the sea water pigment contents, since cellular membranes and acces-
(from either the quay or the boat) or in the mesocosm sory pigments can be responsible for losses of excitation
(Fig. 2a), while the scattered light and LIF signals are energy and for re-absorption. Therefore, laboratory
collected by a Cassegrain telescope focusing on a special calibrations are usually performed on dominant cultures
type fiber optic bundle coupled to photomultipliers for found in the field, where the high sensitivity detection
detection (Fig. 2b). systems based on gated photomultipliers (Fig. 2b) are
By placing suitable narrowband interference filters in used.
front of four photomultipliers, spectral channels were At the beginning of the campaign, instrumental tests
selected, corresponding to water Raman scattering were performed which included monitoring the natural
(402 nm), DOM (450 nm), and phytoplankton pigments community with the laser fluorimeter. The collected
(phycocyanin 650 nm and Chl a 690 nm). The detailed spectra were typical of Dinophyceae, which were actu-
characteristics of the device are listed in Table 3. ally the dominant taxon, although some Chlorophyceae
A personal computer controlled the experimental were also present, as observed by the other participant
settings, i.e. the laser operation mode (emitting at each groups. As characteristic red pigment channel, the
A lidar fluorosensor system for monitoring phytoplankton 797
(a)
Lidar
fluorosensor
PC
Camac
Quay Crate
Oxygen
electrodes
PAR
MESOCOSM
Floating platform
(b)
GATE HV
PMT3 IF3 FO
PMT2 IF2 BE
DF
O2
GPIB-BUS
PAR
Figure 2. Lidar fluorosensor apparatus on the quay during the mesocosm monitoring campaign: (a) sketch of the installation with
PAR detector and two Clark electrodes immersed inside the mesocosm vessel; (b) opto-electronic schematics.
respective chlorophyll emission peak at 680 nm was util- 680 nm holds for the whole range of the natural com-
ized. Natural phytoplankton was sampled with a 25 Ïm munity examined.
net from the quay; diluted solutions were prepared by Continuous measurements of seawater fluorescence
adding natural sea water. The Chl a concentration, as spectra were taken after the reference cell was filled with
determined by the fluorimetric method, was used to the samples taken from about 3 m depth. Each measure-
calibrate the laser fluorimeter data given in Raman ment had a duration of 10 sec (100 shots) at time
units. As shown in Figure 4, a linear relationship intervals of 10 sec. The Chl a concentration profile of
between Chl a concentration and the LIF intensity at September 9 (Fig. 5) is seen to increase throughout the
798 R. Barbini et al.
0.08
0.06
Fλ/Ftot
0.04
0.02
0.00
1 2 3 4 5 6 7 8 9 10 11 12 13
Monitoring cruise
3.2
The cruise on the afternoon of 12 September started at
2.8 the Kristineberg Marine Research Station, crossed the
Chl conc (mg/m3)
2.4 Gullmar fjord, and reached the Ellöse fjord after passing
2.0 near the open sea at an average speed of 5 knots. During
the survey, the lidar fluorosensor continuously collected
1.6
data on water turbidity (at 402 nm), DOM (at 450 nm),
1.2 Chl a concentrations (at 690 nm), and Chl a fluorescence
0.8 yield Y, the last-mentioned by taking advantage of the
lidar pump-and-probe operation mode.
0.4
Chl a concentrations and remotely sensed ETR are
0.0 reported in Figure 7 (a and b, respectively) vs. the cruise
10 11 12 13 14 15 16 17 18
Time (h:d)
running time. We noticed changes in Chl a concen-
tration from the diVerent fjords to the open sea. The
Figure 5. Continuous Chl a concentration measurements in sea evening increase in the chlorophyll channel, recorded on
water in front of the quay (Kristineberg, 9 September 1996).
the way back, has been ascribed to phenomena of
nocturnal bioluminescence caused by Ceratium (dino-
flagellates) whose presence was detected independently.
evolution and laser pump-and-probe yields (Y), and by Because of afternoon irradiance conditions and
recording PAR data and lidar data of turbidity, DOM, cloudy weather, irradiance changes at the sea-surface
and Chl a. level ranged from 50 to 500 Ïmol m "2 sec "1, which
With this technique, an isolated probe laser pulse in caused a variable ETR measured during the investi-
the dark or in the presence of background illumination gation time interval between 10 and 120 Ïmol electrons
triggers the Chl a fluorescence signal F1 (Î=680 nm) m "2 sec "1.
corresponding to the actual state of closure of the
reaction centres (RCs). An intervening intense laser
pulse (pump) switches all the RCs to the closed state, Conclusions
and the fluorescence response F2 (Î=680 nm) can be
triggered by a second probe pulse, provided the pump- The present data taken on phytoplankton cultures
to-probe delay is kept within the quenchers’ life-time show that their visible emission spectrum measured on
(2100 Ïs). The algal fluorescence yield can be calculated near UV excitation of sea water contains information
as: relevant to the remote identification of various algal
families characterized by diVerent fluorescent pigments.
Y=(F2 "F1)/F2 (1) However, the identification requires a careful laboratory
characterization, in which the fluorescence of the growth
Pump-and-probe yield (Y) and PAR data were used to medium for a lot of diVerent species is taken into
compute the remotely sensed electron transport rate account. Mapping the distribution of various algal
(ETR): species in their natural environment is a prominent task.
800 R. Barbini et al.
10
(a)
8
O2
6
4
8 10 12 14 16 18 20 22 24
800 (b)
PAR
400
0
8 10 12 14 16 18 20 22 24
(c)
0.50
Y
0.25
0.00
8 10 12 14 16 18 20 22 24
200 (d)
ETR
100
0
8 10 12 14 16 18 20 22 24
Time (h)
Figure 6. Continuous monitoring of the enriched mesocosm (Kristineberg, 11 September 1996): (a) O2 concentration (mg l "1); (b)
PAR (Ïmol quanta m "2 sec "1); (c) laser yield (Y); (d) ETR (mol electrons m "2 sec "1).
4
(a)
3
Chl (mg/m3)
0
14.5 15.0 15.5 16.0 16.5 17.0 17.5 18.0
120 (b)
100
80
ETR
60
40
20
0
14.5 15.0 15.5 16.0 16.5 17.0 17.5 18.0
Time (h:d)
KMF Gullmar Fjord Open sea Ellose Fjord KMF
Figure 7. Lidar data measured during the cruise (Kristineberg, 12 September 1996): (a) Chl a (mg m "3); (b) ETR (Ïmol electrons
m "2 sec "1).
A lidar fluorosensor system for monitoring phytoplankton 801
In fact, red pigment can easily be recognized but DOM laser pump and probe technique. Remote Sensing Reviews,
dominates the blue emission of sea waters overlapping 15: 323–342.
Bazzani M., Breschi B., Checchi G., Pantani L., Tirelli D.,
other possible algal features.
Valmori G., Carlozzi P., Pelosi E., and Torzillo G. 1992.
On the occasion of the Kristineberg Workshop, the Phytoplankton monitoring by laser induced fluorescence.
complete LIF system, including almost all of its ancillary EARSel Advances in Remote Sensing, 1: 106–110.
sensors (GPS, PAR, O2 electrodes), designed for phyto- Borfecchia, F., Cimbelli, A., De Cecco, L., Della Rocca, A. B.,
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and Ribezzo, S. 1996. Integrated remote sensing mission on
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