Supplementary Table 1. List of Viromes Included in The GOV Dataset

Supplementary Table 1. List of viromes included in the GOV dataset.
Sample ID, (registered at PANGAEA for for

Sample label
Tara Oceans samples, www.pangaea.de)
11_SRF TARA_X000001316
18_SRF TARA_A100000171
18_DCM TARA_A100000172
22_SRF TARA_S200002703
23_DCM TARA_E500000082
25_SRF TARA_E500000318
25_DCM TARA_E500000306
30_DCM TARA_A100001374
31_SRF TARA_A100001392
32_SRF TARA_A100001516,TARA_A100001517
32_DCM TARA_A100001518
33_SRF TARA_A100001201
34_SRF TARA_R100000005
34_DCM TARA_R100000008
36_SRF TARA_R100000028
36_DCM TARA_R100000030
37_MES TARA_R100000049
38_SRF TARA_R100000081,TARA_R100000082
38_DCM TARA_R100000084,TARA_R100000085
38_MES TARA_R100000093
39_SRF TARA_R100000479,TARA_R100000480
39_DCM TARA_R100000482,TARA_R100000483
39_MES TARA_R100000501
41_SRF TARA_R100000455
41_DCM TARA_R100000458
42_SRF TARA_R100000149
42_DCM TARA_R100000152
45_SRF TARA_R100000388
46_SRF TARA_R100000406
48_SRF TARA_R100000426
52_SRF TARA_R100000231
52_DCM TARA_R100000234
56_SRF TARA_R100000353
56_MES TARA_R100000365
58_DCM TARA_R100000278
62_SRF TARA_R100000329
64_SRF TARA_R100000322
64_DCM TARA_R100000315
64_MES TARA_R100000306
65_SRF TARA_R100001230,TARA_R100001231
65_DCM TARA_R100001198,TARA_R100001199
66_SRF TARA_R100000900
66_DCM TARA_R100000908
67_SRF TARA_R100000951,TARA_R100000952
68_SRF TARA_R100000988
68_DCM TARA_R100000995
68_MES TARA_R100000963
70_SRF TARA_R100001015
70_MES TARA_R100001039
72_SRF TARA_R100001079
72_DCM TARA_R100001082
72_MES TARA_R100001086
76_SRF TARA_R100001126
76_DCM TARA_R100001129
76_MES TARA_R100001132
78_SRF TARA_R100001224
78_DCM TARA_R100001163
78_MES TARA_R100001143
82_SRF TARA_R100000541
82_DCM TARA_R100000544
84_SRF TARA_R100000935
85_SRF TARA_R100001369
85_DCM TARA_R100001377
85_MES TARA_R100001244
100_SRF TARA_R100001440
100_DCM TARA_R100001443
100_dDCM TARA_R100001530
102_SRF TARA_R100001460
102_DCM TARA_R100001463
102_MES TARA_R100001480
109_SRF TARA_R100001509
109_DCM TARA_R100001510
111_SRF TARA_R100000654
111_DCM TARA_R100000655
111_MES TARA_R100000656
122_SRF TARA_R100000657
122_DCM TARA_R100000664
122_MES TARA_R100000687
123_SRF TARA_R100001591
123_MIX TARA_R100001594
124_SRF TARA_R100000697
124_MIX TARA_R100000700
125_SRF TARA_R100000805
125_MIX TARA_R100000808
137_SRF TARA_R100000734
137_DCM TARA_R100000742
137_MES TARA_R100000750
138_SRF TARA_R100000773
138_DCM TARA_R100000781
138_MES TARA_R100000789
Malaspina sample label Sample id
MSP81 MP1482
MSP82 MP1493
MSP91 MP1648
MSP97 MP1787
MSP103 MP1896
MSP109 MP2015
MSP112 MP2052
MSP114* MP2097
MSP118 MP2159
MSP121 MP2252
MSP131 MP2498
MSP134 MP2634
MSP144 MP2914
MSP146* MP2968
Supplementary Information Table 1: List of viromes included in the GOV dataset. For each virome, the correspo
n the GOV dataset.
Date/time
expedition station
(yyyymmddThh:mm:ssZ)
Tara Oceans Expedition (2009-2013) TARA_011 2009-10-04T08:30
Tara Oceans Expedition (2009-2013) TARA_030 2009-12-15T15:23:37






expedition station date/time (dd/mm/yy)
Malaspina Expedition (2011) M 81 18/04/11

the GOV dataset. For each virome, the corresponding expedition, station number, and depth is indicated. Tara stations are prefix
latitude (decimal longitude (decimal
degree N) degree E)
41.6686 2.7996
35.759 14.2574
35.7528 14.2765
39.8386 17.4155
42.1735 17.7252
39.3888 19.3905
39.3991 19.3997
33.9235 32.8118
27.16 34.835
23.36 37.2183
23.4183 37.245
21.9467 38.2517
18.3967 39.875
18.4417 39.8567
20.8183 63.5047
20.8222 63.5133
20.8457 63.5851
19.0393 64.4913
19.0284 64.5126
19.0351 64.5638
18.5918 66.622
18.5839 66.4727
18.7341 66.3896
14.6059 69.9776
14.5536 70.0128
6.0001 73.8955
5.9998 73.9067
0.0033 71.6428
-0.6625 73.161
-9.3921 66.4228
-16.957 53.9801
-16.9534 53.9601
-15.3424 43.2965
-15.3379 43.2948
-17.2855 42.2866
-22.3368 40.3412
-29.5019 37.9889
-29.5333 37.9117
-29.5046 37.9599
-35.1728 26.2868
-35.2421 26.3048
-34.9449 17.9189
-34.8901 18.0459
-32.2401 17.7103
-31.0266 4.665
-31.027 4.6802
-31.0198 4.6685
-20.4091 -3.1759
-20.4075 -3.1641
-8.7789 -17.9099
-8.7296 -17.9604
-8.7986 -17.9034
-20.9354 -35.1803
-21.0292 -35.3498
-20.9315 -35.1794
-30.1367 -43.2899
-30.1484 -43.2705
-30.1471 -43.2915
-47.1863 -58.2902
-47.2007 -57.9446
-60.2287 -60.6476
-62.0385 -49.529
-62.2231 -49.2139
-61.9689 -49.5017
-13.0023 -95.9759
-12.9723 -96.0122
-12.9794 -96.0232
-5.2529 -85.1545
-5.2669 -85.2732
-5.261 -85.1678
1.9928 -84.5766
2.0299 -84.5546
-16.9601 -100.6335
-16.9587 -100.6751
-16.9486 -100.6715
-8.9971 -139.1963
-9.0063 -139.1394
-8.9729 -139.2393
-8.9068 -140.283
-8.9109 -140.2845
-9.1504 -140.5216
-9.0714 -140.5973
-8.9111 -142.5571
-8.8999 -142.5461
14.2035 -116.6261
14.2075 -116.6468
14.2025 -116.6433
6.3332 -102.9432
6.3378 -102.9538
6.3559 -103.0598
latitude (decimal longitude (decimal

degree N) degree E)
-28.406 179.141
-25.49 -179.52
-5.75 -170.741
9.22 -163.53
21.064 -150.319
18.04 -133.26
15.909 -124.474
14.53 -118.77
12 -108.06
10.093 -99.246
17.43 -59.83
19.99 -52.637
29.97 -23.69
32.0788 -17.2662
icated. Tara stations are prefixed with “Tara_” and Malaspina stations with an “M” to avoid confusion between stations with iden
environmental feature (http://environmentontology.org/) depth (m)
[SRF] surface water layer (ENVO:00010504), targeting a discrete depth at the top of the photic
5
zone (ENVO:00000209)
5
[DCM] deep chlorophyll maximum layer (ENVO:01000326), targeting a discrete depth within
60
the photic zone (ENVO:00000209), shallowest of two similar environmental features
5
55
the photic zone (ENVO:00000209)
5
50
70
5
5
80
5
5
60
5
17
[MES] marine water layer (ENVO:01000295) within the mesopelagic zone (ENVO:00000213),
targeting a discrete depth between 400-800 m, coinciding with a marine oxygen minimum zone 600
(ENVO:01000065)
5
25
(ENVO:01000065)
5
25
(ENVO:01000065)
5
60
5
80
5
5
5
5
75
5
1000
targeting a discrete depth around 1000 m, at the bottom of the selected environmental feature
66
5
5
65
1000
targeting a discrete depth around 1000 m, at the bottom of the selected environmental feature
5
30
5
30
5
5
50
targeting a discrete depth between 400-800 m, the deepest of two similar environmental 700
features
5
800
targeting a discrete depth around 800 m
5
[DCM] deep chlorophyll maximum layer (ENVO:01000326) 100
800
5
800
5
800
5
40
the photic zone (ENVO:00000209), deepest of two similar environmental features
5
5
90
790
5
50
[DCM] deep chlorophyll maximum layer (ENVO:01000326), deepest of two similar

177
environmental features, coinciding with a marine oxygen minimum zone (ENVO:01000065)
5
40
(ENVO:01000065)
5
30
5
90
(ENVO:01000065)
5
600
targeting a discrete depth between 400-800 m
5
[MIX] marine epipelagic wind mixed layer (ENVO:01000061), targeting a discrete depth within
150
the photic zone (ENVO:00000209), bottom of the selected environmental feature
5
120
5
140
5
40
375
targeting a discrete depth between 200-400 m, at the top of the selected environmental feature
5
60
450
targeting a discrete depth between 400-800 m
environmental feature (http://environmentontology.org/) depth (m)
[BAT] marine water layer (ENVO:01000295) within the bathypelagic zone (ENVO:00000211),
3501.1
targeting a discrete depth within the aphotic zone (ENVO:00000210)
2150.1
4017.7
3818.1
4012.8
4004
4002.4
294
targeting a discrete depthcoinciding with a marine oxygen minimum zone (ENVO:01000065)
3103.1
3007.9
4003.3
4002.7
4003.5
4002
_” and Malaspina stations with an “M” to avoid confusion between stations with identical numbers across both expeditions. Acce
Ocean and sea region (IHO General Sea
Marine biome Areas 1953) [abbreviation] full name
(Longhurst 2007) (MRGID:ID) registered at
www.marineregions.org
Westerlies Biome [MS] Mediterranean Sea (MRGID:1905)
Coastal Biome [RS] Red Sea (MRGID:4264)

Coastal Biome [IO] Indian Ocean (MRGID:1904)
Trades Biome [IO] Indian Ocean (MRGID:1904)


Coastal Biome [SAO] South Atlantic Ocean (MRGID:1914)
Trades Biome [SAO] South Atlantic Ocean (MRGID:1914)

Polar Biome [SO] Southern Ocean (MRGID:1907)
Trades Biome [SPO] South Pacific Ocean (MRGID:1910)

Coastal Biome [NPO] North Pacific Ocean (MRGID:1908)
Coastal Biome [NPO] North Pacific Ocean (MRGID:1908)

Trades Biome [NPO] North Pacific Ocean (MRGID:1908)
Ocean and sea region (IHO General Sea

Areas 1953) [abbreviation] full name
Watermass
(MRGID:ID) registered at
www.marineregions.org
Circumpolar Deep Water [SPO] South Pacific Ocean (MRGID:1910)
Circumpolar Deep Water [NPO] North Pacific Ocean (MRGID:1908)

* [NPO] North Pacific Ocean (MRGID:1908)
North Atlantic Deep Water [NAO] North Atlantic Ocean (MRGID:1912)
* [NAO] North Atlantic Ocean (MRGID:1912)
both expeditions. Accession numbers are given for raw reads available in ENA (for Tara Oceans samples) and on JGI IMG (for
Nitrate concentration
Temperature,
(µmoles/L), calculated
Biogeographical province (Longhurst 2007) calculated average
average (sensors
[abbreviation] full name (MRGID:ID) (sensors calibrated
calibrated using
registered at www.marineregions.org using factory
measurements on
calibration)
water samples)
[MEDI] Mediterranean Sea, Black Sea Province

NaN NaN
(MRGID:21465)

21.4395 NaN
(MRGID:21465)

18.36839 NaN
(MRGID:21465)

17.041483 NaN
(MRGID:21465)

15.705783 NaN
(MRGID:21465)

18.342533 NaN
(MRGID:21465)

15.161277 NaN
(MRGID:21465)

18.979535 0.254406
(MRGID:21465)
[REDS] Red Sea, Persian Gulf Province

25.0621 -0.137284
(MRGID:21474)

25.824383 -0.541919
(MRGID:21474)

26.050367 1.201064
(MRGID:21474)
27.329517 -0.000271
(MRGID:21474)

27.59865 -0.927087
(MRGID:21474)

27.589917 0.08645
(MRGID:21474)
[ARAB] Northwest Arabian Sea Upwelling

25.581433 NaN
Province (MRGID:21475)

25.37395 0.367767

12.066048 31.802451
[MONS] Indian Monsoon Gyres Province

26.2314 0.889376
(MRGID:21471)

25.494408 1.230122
(MRGID:21471)

14.987618 22.444602
(MRGID:21471)

26.81765 -1.415582
(MRGID:21471)

26.812225 -0.611888
(MRGID:21471)

15.614195 19.566542
(MRGID:21471)

29.089367 -1.343153
(MRGID:21471)

27.117663 -0.224514
(MRGID:21471)
29.980283 -1.47882
(MRGID:21471)

27.723425 0.569531
(MRGID:21471)

30.496383 2.575786
(MRGID:21471)

30.12565 0.477267
(MRGID:21471)
[ISSG] Indian South Subtropical Gyre Province

29.818233 -2.201764
(MRGID:21472)

27.8684 NaN
(MRGID:21472)

24.89426 0.244232
(MRGID:21472)
[EAFR] Eastern Africa Coastal Province

27.323117 NaN
(MRGID:21473)

6.23622 NaN
(MRGID:21473)

25.308318 0.820273
(MRGID:21473)

25.080167 -0.166794
(MRGID:21473)

22.165567 NaN
(MRGID:21473)

22.250309 -0.112031
(MRGID:21473)

7.6502 NaN
(MRGID:21473)
21.81684 NaN
(MRGID:21473)

21.81495 NaN
(MRGID:21473)
[BENG] Benguela Current Coastal Province

15.033492 2.450991
(MRGID:21470)

15.01895 NaN
(MRGID:21470)

12.83445 0.405607
(MRGID:21470)
[SATL] South Atlantic Gyral Province

16.832058 NaN
(MRGID:21459)

16.787411 NaN
(MRGID:21459)

7.026748 25.846888
(MRGID:21459)

19.776808 0.168013
(MRGID:21459)

4.216697 37.7793
(MRGID:21459)

25.02619 0.263475
(MRGID:21459)

24.112672 0.241265
(MRGID:21459)

4.673875 38.448475
(MRGID:21459)

23.349542 0.030608
(MRGID:21459)
21.643283 0.580918
(MRGID:21459)

4.749588 34.589515
(MRGID:21459)

19.854083 -0.385346
(MRGID:21459)

19.30925 0.478929
(MRGID:21459)

5.8659 29.783185
(MRGID:21459)
[FKLD] Southwest Atlantic Shelves Province

7.321517 17.091069
(MRGID:21469)
[FKLD] Southwest Atlantic Shelves Province

6.975635 17.111823
(MRGID:21469)
[ANTA] Antarctic Province (MRGID:21502) 1.84402 24.423039
[ANTA] Antarctic Province (MRGID:21502) -0.78154 33.109231
[SPSG] South Pacific Subtropical Gyre

25.2512 4.590737
Province, North and South (MRGID:21486)

20.649431 1.501977

13.014573 21.068385
[PEOD] Pacific Equatorial Divergence Province
24.943108 11.688971
(MRGID:21489)

19.566255 20.328327
(MRGID:21489)

9.195825 40.008967
(MRGID:21489)
[CHIL] Chile-Peru Current Coastal Province

27.617558 1.210114
(MRGID:21495)
[CHIL] Chile-Peru Current Coastal Province

26.532035 3.886605
(MRGID:21495)

22.76873 2.568726

19.881449 1.411516

10.893125 30.409013

26.54413 3.986359

24.69625 2.333576

7.212238 42.53205

26.576175 3.868407

NaN NaN

26.518986 5.111856
NaN NaN

26.780158 4.985942

NaN NaN
[PNEC] North Pacific Equatorial Countercurrent

26.4091 3.241307

18.594842 11.003135

8.911481 35.716708

26.6362 -1.184318

19.048358 22.087762

8.210557 36.886053
Basin Salinity
Fiji basin 34.6818
Out of basins 34.6456
Pacific basin 34.6955

* 34.69
Guatemala basin 34.6755
North American basin 34.9004
North American basin 34.8889
Canary basin 34.9071
* 34.9058
lable in ENA (for Tara Oceans samples) and on JGI IMG (for Malaspina samples). Longhurst provinces and biomes are defined
Phosphate
Nitrite concentration Chlorophyll a
concentration Oxygen concentration
(µmoles/L), calculated concentration (µg/L),
(µmoles/L), calculated (µmoles/kg), calculated
average (sensors calculated average
average (sensors average (sensors
calibrated using (sensors calibrated
calibrated using calibrated using
measurements on using measurements
measurements on WOA09 climatology)
water samples) on water samples)
water samples)
NaN NaN NaN NaN
0.018 0.026 207.791417 0.048898
0.025 0.013 237.8893 0.132494
0.07 0.02 220.927083 0.180911
0.01 0.01 224.266917 0.236208
0 0.01 218.016833 0.121845
0.07 0.07 229.547682 0.201016
0.01 0 218.132538 0.141478
0.014 0.024 188.763583 0.048898
0.014 0.018 188.416583 0
0.01 0.025 179.968 0.224444

0 0.053 182.812167 0.163228
0.02 0.19 184.061167 0.186697
0.27 0.09 175.384083 0.181406
0.05 0.37 104.908417 0.129697
0.51 0.51 211.606583 0.353707
0.07 2.91 1.63999 0.005649
0.01 0.32 199.9355 0.161808
0.7 0.42 154.699917 0.604752
0.69 2.64 2.369225 0.014107
0.01 0.23 193.3535 0.099089
0.02 0.26 192.95875 0.17638
2.07 2.64 2.303017 0.006724
0 0.14 187.42925 0.020173
0.07 0.34 148.328125 0.47554

0 0.08 189.25475 0.006724
0.15 0.34 132.77885 0.388348
0.02 1.94 185.243833 0.026898
0 0.1 185.733167 0.121909
0.01 0.08 187.2575 0
0 0.12 191.68 0.176565
0.03 0.18 192.55925 0.394226
NaN NaN 193.05775 0.04282
NaN NaN 88.1626 0
0.03 0 185.01 0.332199
NaN NaN 199.895917 0.089746
0 0.08 210.00775 0.162993
0 0.08 207.446227 0.214573
0 1.12 193.011 0
NaN NaN 207.0439 0.215292
NaN NaN 206.43725 0.272648
0.3 0.34 238.916333 0.250054
0.26 0.37 240.4135 0.424363
0.171 1.016 249.351417 1.551493
0.25 0.229 231.914833 0.201517
0.285 0.227 231.683361 0.42458
0.003 1.529 195.168847 0.011208
0.054 0.364 215.650833 0.324315
0.01 2.522 161.730633 0.003811
0.003 0.104 199.1195 0.050608
0.011 0.143 194.428431 0.263939
0.007 2.618 143.1955 0
0.001 0.056 206.194333 0.033622

0.015 0.038 203.814833 0.150865
0.001 0.937 192.1655 0
0 0 221.47475 0.053173
0.053 0 217.140667 0.226052
0 1.946 214.842 0
0.151 1.301 305.012167 0.310844
0.135 1.416 306.211529 1.01772
0.266 1.723 338.2982 0.109555
0.107 2.111 343.4373 0.065273
0.06 2.309 325.402987 0.540091
0.018 2.614 203.8394 0.010087
0.14 0.68 200.233917 0.287892
0.16 0.78 216.790338 0.366887
0.03 2.68 0.70843 0.121464

0.32 1 205.992583 0.238224
1.2 1.86 103.916711 0.728939
0.01 2.85 4.42525 0.010087
0.04 0.27 198.635833 0.28167
0.11 0.5 203.127654 0.737378
0.04 0.5 208.8654 0.203347
0.2 0.44 211.54555 0.378549
0.01 2.73 3.171063 0
0.12 0.57 186.2407 0.166512
0.1 0.59 179.916875 0.295808
0.02 2.43 38.115125 0
0.14 0.53 189.758333 0.319103
NaN NaN NaN NaN
0.16 0.63 190.724 0.286662

NaN NaN NaN NaN
0.19 0.56 187.302833 0.233673
NaN NaN NaN NaN
0.07 0.46 195.126917 0.290611
0.31 0.88 95.411833 0.62525
0.01 2.95 0.628413 0.001625
0 0.16 196.88275 0.013449
0.83 1.11 77.038525 0.334076
0.01 3.16 0.78015 0.002017

provinces and biomes are defined based on Longhurst (Longhurst, 2007) and environmental features are defined based on Envi
Sample accession
Run accession number(s)
Sample ID, registered number(s) registered at
registered at the European
at PANGAEA the European # Reads
Nucleotides Archive
(www.pangaea.de) Nucleotides Archive
(www.ebi.ac.uk/ena)
(www.ebi.ac.uk/ena)
TARA_X000001316 ERS488253 ERR599383 2.69E+07
TARA_A100000171 ERS488340 ERR594358 9.50E+07
TARA_A100000172 ERS488354 ERR594352 8.35E+07
TARA_S200002703 ERS488448 ERR594406,ERR594378 1.15E+08
TARA_E500000082 ERS478007 ERR594408 8.28E+07
TARA_E500000318 ERS488499 ERR594396 1.04E+08
TARA_E500000306 ERS488518 ERR594375 1.05E+08
TARA_A100001374 ERS478052 ERR594405 7.82E+07
TARA_A100001392 ERS488558 ERR594401, ERR594410 1.34E+08
TARA_A100001516,TA
ERS488589,ERS488590 ERR594393 1.02E+08
RA_A100001517
TARA_A100001518 ERS488613 ERR594360 1.29E+08

TARA_A100001201 ERS488636 ERR599350 9.52E+07
TARA_R100000005 ERS488673 ERR594370, ERR594368 1.23E+08
TARA_R100000008 ERS488701 ERR594390 8.17E+07
TARA_R100000028 ERS488737 ERR594369 7.43E+07
TARA_R100000030 ERS488757 ERR594402 7.73E+07
TARA_R100000049 ERS488791 ERR599372 1.02E+08
TARA_R100000081,TA
ERS488813,ERS488814 ERR594400, ERR594374 1.14E+08
RA_R100000082
TARA_R100000084,TA
ERS488836,ERS488837 ERR594386, ERR594399 9.42E+07
RA_R100000085
TARA_R100000093 ERS488867 ERR599379 7.01E+07
TARA_R100000479,TA
ERS488892,ERS488893 ERR594356, ERR594365 1.14E+08
RA_R100000480
TARA_R100000482,TA
ERS488929,ERS488930 ERR594363, ERR594397 9.08E+07
RA_R100000483
TARA_R100000501 ERS488959 ERR599360 1.04E+08
TARA_R100000455 ERS489059 ERR594384 8.53E+07
ERR594371, ERR594372,
TARA_R100000458 ERS489084 ERR594373, ERR594366, 2.00E+08
ERR594367
TARA_R100000152 ERS489148 ERR594413 1.20E+08
TARA_R100000388 ERS489257 ERR599356 1.20E+08
TARA_R100000406 ERS489285 ERR594376 7.74E+07
TARA_R100000426 ERS489332 ERR599344 9.44E+07
TARA_R100000231 ERS489552 ERR599358 1.01E+08
TARA_R100000234 ERS489603 ERR594394 9.30E+07
TARA_R100000353 ERS489724 ERR599376 1.13E+08
TARA_R100000365 ERS489729 ERR599371 1.04E+08
TARA_R100000278 ERS489867 ERR599362 1.03E+08
TARA_R100000329 ERS489904 ERR599339 1.21E+08
TARA_R100000322 ERS489943 ERR594392 9.65E+07
TARA_R100000315 ERS490026 ERR594385 8.57E+07
TARA_R100000306 ERS489996 ERR599351 1.03E+08

TARA_R100001230,TA
ERS490053,ERS490054 ERR594361, ERR594359 1.19E+08
RA_R100001231
TARA_R100001198,TA
ERS490120,ERS490121 ERR594414, ERR594382 1.13E+08
RA_R100001199
TARA_R100000900 ERS490142 ERR594362 8.79E+07
TARA_R100000908 ERS490180 ERR594389 9.38E+07
TARA_R100000951,TA
ERS490204,ERS490205 ERR594395, ERR594404 8.79E+07
RA_R100000952
TARA_R100000988 ERS490285 ERR594391 8.96E+07
TARA_R100000995 ERS490320 ERR594415 8.19E+07
TARA_R100000963 ERS490245 ERR599382 9.71E+07
TARA_R100001015 ERS490346 ERR594353 9.44E+07
TARA_R100001039 ERS490388 ERR594407 8.25E+07
TARA_R100001079 ERS490452 ERR594364 8.00E+07
TARA_R100001082 ERS490494 ERR594379 9.76E+07
TARA_R100001086 ERS490522 ERR594388 1.94E+08
TARA_R100001126 ERS490557 ERR594354 1.00E+08

TARA_R100001129 ERS490610 ERR594355 1.18E+08
TARA_R100001224 ERS490676 ERR594411 7.63E+07
TARA_R100001163 ERS490704 ERR599374 1.07E+08
TARA_R100001143 ERS490727 ERR599361 9.77E+07
TARA_R100000541 ERS490900 ERR599384 9.22E+07
TARA_R100000544 ERS490953 ERR594409 8.38E+07
TARA_R100000935 ERS491016 ERR599352 1.11E+08
TARA_R100001369 ERS491063 ERR599364 1.16E+08
TARA_R100001377 ERS491107 ERR594377 8.87E+07
TARA_R100001244 ERS491123 ERR599373 9.62E+07
TARA_R100001440 ERS491851 ERR599342 9.38E+07
TARA_R100001443 ERS491897 ERR599359 1.00E+08
TARA_R100001530 ERS491930 ERR599375 8.39E+07

TARA_R100001460 ERS491955 ERR599353 8.25E+07
TARA_R100001463 ERS492035 ERR599349 8.33E+07
TARA_R100001480 ERS491995 ERR599346 1.02E+08
TARA_R100001509 ERS492160 ERR594412 9.16E+07
ERR594387, ERR594381,
TARA_R100001510 ERS492198 ERR594383, ERR594380, 1.64E+08
ERR594357
TARA_R100000654 ERS492342 ERR599357 9.52E+07
TARA_R100000655 ERS492376 ERR599369 1.03E+08
TARA_R100000656 ERS492399 ERR599368 9.05E+07
TARA_R100000657 ERS492657 ERR599380 1.20E+08
TARA_R100000664 ERS492714 ERR599377 9.46E+07
TARA_R100000687 ERS492692 ERR599341 1.26E+08
TARA_R100000697 ERS492843 ERR599354 1.34E+08

TARA_R100000700 ERS492877 ERR599367 7.67E+07
TARA_R100000805 ERS492903 ERR599337 1.12E+08
TARA_R100000808 ERS492941 ERR599338 1.26E+08
TARA_R100000734 ERS493651 ERR599363 7.28E+07
TARA_R100000742 ERS493684 ERR599340 7.22E+07
TARA_R100000750 ERS493718 ERR599366 6.57E+07
TARA_R100000773 ERS493767 ERR599355 8.69E+07
TARA_R100000781 ERS493803 ERR599345 7.67E+07
TARA_R100000789 ERS493835 ERR599365 9.55E+07
sample ID JGI Project Id # Reads
MP1482 1020022 1.94E+07
MP1493 1020024 2.35E+07
MP1648 1020026 2.28E+07
MP1787 1020028 2.65E+07
MP1896 1020030 2.41E+07
MP2015 1020032 2.29E+07

MP2052 1020034 3.27E+07
MP2097 1020036 4.20E+07
MP2159 1020038 3.61E+07
MP2252 1020040 3.11E+07
MP2498 1020042 3.25E+07
MP2634 1020044 2.47E+07
MP2914 1020046 3.21E+07
MP2968 1020048 2.63E+07
tures are defined based on Environment Ontology (http://environmentontology.org/). The total number of reads and bp sequenced
# bp mapped to
# bp mapped to viral contigs
# bp viral (outside of a
populations viral
population)
2.53E+09 1.13E+08 3.47E+08
8.86E+09 2.95E+08 1.03E+09
7.88E+09 4.33E+08 2.27E+09
1.12E+10 7.94E+08 2.70E+09
8.07E+09 6.31E+08 2.11E+09
1.02E+10 5.92E+08 2.20E+09
1.01E+10 3.80E+08 1.74E+09
7.32E+09 4.14E+08 1.83E+09
1.29E+10 4.71E+08 1.91E+09
9.89E+09 6.72E+08 2.55E+09
1.16E+10 3.05E+08 4.00E+08

9.37E+09 6.60E+08 2.41E+09
1.19E+10 6.32E+08 2.74E+09
7.98E+09 6.48E+08 1.48E+09
7.16E+09 4.16E+08 1.89E+09
7.53E+09 5.38E+08 2.25E+09
9.70E+09 1.18E+08 5.76E+08
1.11E+10 7.89E+08 3.02E+09
9.09E+09 6.13E+08 2.40E+09
6.57E+09 1.39E+08 1.13E+09
1.11E+10 7.23E+08 3.00E+09
8.77E+09 5.54E+08 2.43E+09
9.88E+09 1.92E+08 9.52E+08
8.28E+09 2.85E+08 1.93E+09
1.79E+10 8.99E+08 3.77E+09

9.63E+09 3.13E+08 2.23E+09
1.17E+10 6.46E+08 2.62E+09
1.16E+10 4.45E+08 3.29E+09
7.39E+09 3.83E+08 1.70E+09
9.01E+09 4.48E+08 2.79E+09
9.73E+09 6.14E+08 2.72E+09
9.06E+09 5.60E+08 2.32E+09
1.08E+10 5.55E+08 2.84E+09
9.77E+09 2.68E+08 4.61E+08
9.89E+09 6.04E+08 2.72E+09
1.18E+10 6.71E+08 3.34E+09
9.32E+09 3.92E+08 1.85E+09
8.33E+09 5.14E+08 2.12E+09
9.82E+09 7.30E+07 7.53E+08

1.14E+10 7.15E+08 2.62E+09
1.10E+10 6.87E+08 2.49E+09
8.49E+09 4.12E+08 1.33E+09
9.04E+09 4.27E+08 1.40E+09
8.51E+09 6.14E+08 1.93E+09
8.59E+09 3.50E+08 1.59E+09
7.78E+09 4.68E+08 2.03E+09
9.18E+09 1.36E+08 1.26E+09
9.20E+09 4.94E+08 2.05E+09
7.83E+09 6.25E+07 2.64E+08
7.79E+09 3.77E+08 1.80E+09
9.56E+09 6.67E+08 2.53E+09
1.84E+10 6.43E+08 3.86E+09
9.70E+09 3.16E+08 1.74E+09

1.15E+10 5.42E+08 2.15E+09
7.95E+09 8.35E+07 6.76E+08
7.27E+09 3.69E+08 1.66E+09
1.05E+10 7.49E+08 2.70E+09
9.38E+09 1.15E+08 7.78E+08
8.87E+09 3.09E+09 1.66E+09
8.07E+09 1.04E+09 2.17E+09
1.08E+10 2.75E+08 1.03E+09
1.10E+10 2.66E+08 1.70E+09
8.38E+09 2.48E+08 1.73E+09
9.09E+09 1.86E+08 1.30E+09
9.11E+09 7.56E+08 3.22E+09
9.77E+09 8.26E+08 2.87E+09
8.07E+09 2.35E+08 1.46E+09

8.02E+09 6.40E+08 2.70E+09
8.13E+09 7.03E+08 2.27E+09
9.86E+09 4.82E+08 2.38E+09
9.02E+09 5.52E+08 2.12E+09
1.54E+10 1.03E+09 4.57E+09
9.27E+09 7.20E+08 3.32E+09
9.98E+09 9.03E+08 2.83E+09
8.67E+09 1.38E+08 9.99E+08
1.15E+10 6.47E+08 3.63E+09
9.03E+09 1.34E+09 2.47E+09
1.23E+10 2.16E+08 1.21E+09
1.02E+10 7.98E+08 3.07E+09
1.14E+10 1.66E+09 2.95E+09
1.32E+10 9.78E+08 4.29E+09

7.52E+09 1.04E+09 2.22E+09
1.10E+10 1.45E+09 3.52E+09
1.23E+10 2.52E+09 2.89E+09
7.11E+09 5.19E+08 2.06E+09
7.03E+09 4.31E+08 1.66E+09
6.23E+09 2.77E+08 5.55E+08
8.46E+09 4.25E+08 2.71E+09
7.36E+09 3.21E+08 1.60E+09
8.86E+09 1.94E+08 6.27E+08
# bp mapped to
short viral
# bp mapped to
contigs
# bp viral
(outside of a
populations
viral
population)
3.10E+09 9.79E+06 7.87E+07
3.76E+09 1.30E+07 8.03E+07
3.66E+09 2.20E+07 1.00E+08
4.23E+09 3.06E+07 1.06E+08
3.84E+09 5.60E+07 1.14E+08
3.59E+09 4.32E+07 6.94E+07

5.16E+09 3.34E+07 1.21E+08
6.66E+09 4.70E+07 4.22E+08
5.72E+09 2.66E+07 1.30E+08
4.98E+09 2.67E+07 1.61E+08
5.18E+09 2.79E+07 1.21E+08
3.95E+09 2.46E+07 9.42E+07
4.99E+09 1.39E+07 7.06E+07
4.14E+09 5.87E+06 7.67E+07
number of reads and bp sequenced, as well as the number of bp mapped to viral contigs within and outside of populations are ind
de of populations are indicated. *Malaspina stations for which no watermass or basin data are available because these were not i
cause these were not included in the previous study35.

Supplementary Table 1. List of Viromes Included in The GOV Dataset

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Supplementary Table 1. List of Viromes Included in The GOV Dataset

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Supplementary Table 1. List of viromes included in the GOV dataset.

Sample ID, (registered at PANGAEA for for

Malaspina sample label Sample id

Tara Oceans Expedition (2009-2013) TARA_011 2009-10-04T08:30

Tara Oceans Expedition (2009-2013) TARA_018 2009-11-02T08:13

Tara Oceans Expedition (2009-2013) TARA_018 2009-11-02T14:07

Tara Oceans Expedition (2009-2013) TARA_022 2009-11-16T08:16

Tara Oceans Expedition (2009-2013) TARA_023 2009-11-18T13:50

Tara Oceans Expedition (2009-2013) TARA_025 2009-11-23T09:12

Tara Oceans Expedition (2009-2013) TARA_025 2009-11-23T13:52

Tara Oceans Expedition (2009-2013) TARA_030 2009-12-15T15:23:37

Tara Oceans Expedition (2009-2013) TARA_031 2010-01-09T07:15

Tara Oceans Expedition (2009-2013) TARA_032 2010-01-11T07:21

Tara Oceans Expedition (2009-2013) TARA_032 2010-01-11T14:17

Tara Oceans Expedition (2009-2013) TARA_034 2010-01-20T04:27

Tara Oceans Expedition (2009-2013) TARA_034 2010-01-20T11:50

Tara Oceans Expedition (2009-2013) TARA_036 2010-03-12T06:06

Tara Oceans Expedition (2009-2013) TARA_036 2010-03-12T12:23

Tara Oceans Expedition (2009-2013) TARA_037 2010-03-12T17:08:47

Tara Oceans Expedition (2009-2013) TARA_038 2010-03-15T03:35

Tara Oceans Expedition (2009-2013) TARA_038 2010-03-15T11:18

Tara Oceans Expedition (2009-2013) TARA_038 2010-03-16T06:13:30

Tara Oceans Expedition (2009-2013) TARA_039 2010-03-18T04:27

Tara Oceans Expedition (2009-2013) TARA_039 2010-03-18T11:33

Tara Oceans Expedition (2009-2013) TARA_039 2010-03-20T08:15:28

Tara Oceans Expedition (2009-2013) TARA_041 2010-03-30T02:47

Tara Oceans Expedition (2009-2013) TARA_041 2010-03-30T10:56

Tara Oceans Expedition (2009-2013) TARA_042 2010-04-04T09:50

Tara Oceans Expedition (2009-2013) TARA_045 2010-04-13T03:21

Tara Oceans Expedition (2009-2013) TARA_046 2010-04-15T02:01

Tara Oceans Expedition (2009-2013) TARA_048 2010-04-19T07:56

Tara Oceans Expedition (2009-2013) TARA_052 2010-05-17T04:10

Tara Oceans Expedition (2009-2013) TARA_052 2010-05-17T11:42

Tara Oceans Expedition (2009-2013) TARA_056 2010-06-26T07:05

Tara Oceans Expedition (2009-2013) TARA_056 2010-06-26T07:12:30

Tara Oceans Expedition (2009-2013) TARA_058 2010-06-29T15:00

Tara Oceans Expedition (2009-2013) TARA_062 2010-07-03T08:09

Tara Oceans Expedition (2009-2013) TARA_064 2010-07-07T04:48

Tara Oceans Expedition (2009-2013) TARA_064 2010-07-08T06:21

Tara Oceans Expedition (2009-2013) TARA_064 2010-07-07T12:13:35

Tara Oceans Expedition (2009-2013) TARA_065 2010-07-12T11:03:22

Tara Oceans Expedition (2009-2013) TARA_066 2010-07-15T12:22

Tara Oceans Expedition (2009-2013) TARA_066 2010-07-15T15:36:10

Tara Oceans Expedition (2009-2013) TARA_067 2010-09-07T06:19

Tara Oceans Expedition (2009-2013) TARA_068 2010-09-14T06:55

Tara Oceans Expedition (2009-2013) TARA_068 2010-09-14T13:30

Tara Oceans Expedition (2009-2013) TARA_068 2010-09-13T13:02:33

Tara Oceans Expedition (2009-2013) TARA_070 2010-09-21T06:55

Tara Oceans Expedition (2009-2013) TARA_070 2010-09-21T11:57:54

Tara Oceans Expedition (2009-2013) TARA_072 2010-10-05T08:00

Tara Oceans Expedition (2009-2013) TARA_072 2010-10-05T15:35

Tara Oceans Expedition (2009-2013) TARA_072 2010-10-06T07:58:54

Tara Oceans Expedition (2009-2013) TARA_076 2010-10-16T09:55

Tara Oceans Expedition (2009-2013) TARA_076 2010-10-17T09:05:05

Tara Oceans Expedition (2009-2013) TARA_078 2010-11-04T10:24

Tara Oceans Expedition (2009-2013) TARA_078 2010-11-04T18:16:53

Tara Oceans Expedition (2009-2013) TARA_078 2010-11-05T12:33:27

Tara Oceans Expedition (2009-2013) TARA_082 2010-12-06T10:33

Tara Oceans Expedition (2009-2013) TARA_082 2010-12-06T18:58

Tara Oceans Expedition (2009-2013) TARA_084 2011-01-03T11:05

Tara Oceans Expedition (2009-2013) TARA_085 2011-01-06T10:38

Tara Oceans Expedition (2009-2013) TARA_085 2011-01-06T19:34:21

Tara Oceans Expedition (2009-2013) TARA_085 2011-01-07T10:39:47