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Volume 38 | Number 4
JULY/AUGUST 2017 | $9.95
Gene
Drives
A Fork in the
Road for the
GMO Debate
Why Education Doesnt Lead to GM Food Acceptance Should We Burst Our News Filter Bubble?
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CONTENTS
FEATURES
14 Gene Drives: A Way to Genetically Engineer Populations
Charles Robin
Gene drives occur when a bias in the mechanism of inheritance spreads
particular genetic variants through a population. Developments in gene-
editing technology now make it possible to construct gene drives that
address problems in health, agriculture and conservation.
38 A Quantum of Silence
Luke Helt & Michael Steel
Current silicon photon sources produce noise photons that interfere
with potential applications such as quantum computing, but new
research has discovered a method to quieten this quantum chaos. 38
JULY/AUGUST 2017 | |3
CONTENTS
conSCIENCE
40 Bursting the News Filter Bubble
Online technologies can create echo chambers that reinforce our
world views, but does this necessarily mean we need to open
ourselves up to alternative facts?
6 Browse
A round-up of science news from our shores.
41 Neuropsy
A new study proposes a biological cause for misophonia
the pathological hatred of sounds.
42 Directions
The Finkel Review provides a roadmap to investment in clean
energy technologies.
40 43 Expert Opinion
The Finkel Reviews blueprint for the national electricity market
risks falling short of Australias task and opportunities in reducing
carbon emissions.
46 EcoLogic
41 What is the state of our understanding of the connection between
climate change and ecosystem-service assessment?
47 Lowe Tech
CSIRO predicted the increasing severity of cyclones 30 years ago.
49 Quandary
The dismal death of Brooke Verity illustrates the need for
longitudinal studies of the long-term outcomes of surrogacy.
50 Australasian Sky
47 Your maps of the night sky for May and June.
4| | JULY/AUGUST 2017
UP FRONT
parasite. Ella Kelly (p.20) then explains how conservationists may employ gene drives to PRINT POST APPROVED PP 331379/0032
Cover Story
Guy Nolch is the Editor and Publisher of Australasian Science.
@austscience facebook.com/austscience
JULY/AUGUST 2017 | |5
BROWSE Compiled by Guy Nolch
6| | JULY/AUGUST 2017
Night Phone Use
Harms Adolescent
Mental Heath
Late-night mobile phone use by adolescents is
directly linked to poor quality sleep, leading to
poorer mental health outcomes, reduced coping
and lowered self-esteem according to the rst
longitudinal study that has investigated how
night phone use and mental health were
connected.
We have demonstrated how poor sleep is
the key link connecting an increase in night-
time mobile use with subsequent increases in
psychosocial issues, said lead researcher Dr
Lynette Vernon of Murdoch University.
Heavy mobile phone use becomes a problem
when it overtakes essential aspects of adolescent
life. In this case, we see issues when it overtakes
time set aside for sleep. We found that late night
phone use directly contributed to poor sleep
mariesacha/Adobe
habits, which over time led to declines in overall
well-being and mental health.
The research was part of the Youth Activity Participation Study,
which surveyed 1100 students from 29 Australian schools annu-
ally from Year 8 until Year 11. Students were asked what time of
the night they received or sent text messages and phone calls, and
their perceptions of their sleep quality. The researchers also inves-
tigated adolescents symptoms of depressed mood, involvement
in delinquency or aggression, and their coping and self esteem over
time.
In Year 8, more than 85% of students owned a mobile phone
and around one-third of these students reported they never texted
or received phone calls after lights out. Three years later, however,
93% of the students owned mobiles and 78% of these Year 11
SUBS
students reported late night mobile use.
We found that those teenagers who start out as relatively
healthy in terms of their late-night mobile use early in high school
tend to show steeper escalations in their late-night mobile use over
@ aus C R
tscien IBE
the next several years, said study co-author Dr Kathryn Modecki
of Grith University. This means that even when teens appear
to have their technology and sleep under control early on, they
ce. com
still require monitoring and education as they mature.
Students with high initial levels of night-time mobile phone
use also tended to have higher initial levels of poor sleep behaviour,
Vernon said. As their levels of mobile phone use grew over time,
so did their poor sleep behaviour. Get full online access plus
What is especially compelling, Modecki added, is that these
increases in poor sleep, in turn, led to rises in depressed mood and additional content when
externalising behaviours, and declines in self-esteem and coping
1 year later.
you subscribe online at
e
Adob
Vernon said that although these results were concerning, the austscience.com
wski/
JULY/AUGUST 2017 | |7
Fossils Help Determine Oceans Role in Last Ice Age
Scientists from The University of Tasmanias Institute for Marine and biological clues left by tiny fossils in mud from the sea floor to
Antarctic Studies and Simon Fraser University have used the fossil understand past temperatures. Past ocean temperatures can be
record to pull together the first global database of ocean estimated by counting the number of cold versus warm fossils of
temperatures over the past 125,000 years in order to explain why species with known distinct temperature preferences.
carbon dioxide levels were low at the time. The team trawled the scientific literature for studies of past sea
The study, published in Earth and Planetary Science Letters, surface temperatures, with data from 136 locations around the globe
combined ocean temperature records with other studies to show how providing more than 40,000 estimates of temperature. Weve
carbon dioxide took different paths into the deep sea during different combined the individual efforts of hundreds of scientists, said A/Prof
phases of the ice age. Zanna Chase. What emerges is a remarkably clear picture of how the
This study shows for the first time how temperatures changed ocean changed during the last ice age.
across the whole ocean as the earth entered the last ice age, said The data revealed that atmospheric carbon dioxide dropped in
lead author A/Prof Karen Kohfeld. This new understanding of ocean several steps over 100,000 years as the Earth entered the last ice age
temperature changes hints at some important thresholds in the 20,000 years ago. The first drop in carbon dioxide, 115,000 years ago,
climate system. occurred because of early cooling of the poles and expansion of sea-
Its clear that some parts of the system, such as sea-ice around ice around Antarctica. The second carbon dioxide drop 70,000 years
Antarctica, responded rapidly when the ocean cooled. Other parts, like ago was accompanied by a reorganisation of the deep ocean and
deep ocean circulation, changed very slowly and needed a nudge of heightened ocean productivity. The lowest ice age carbon dioxide
extra cooling to push the system into a new state, a whole 30,000 years levels occurred 20,000 years ago when ocean temperatures,
after the sea-ice changed. productivity, deep circulation and sea-ice had changed the most.
With direct measurements only providing ocean temperatures for The teams next step is to combine the new temperature database
approximately the past 100 years, the researchers used chemical and with palaeoclimate models to test their theories.
JULY/AUGUST 2017 | |9
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10 | | JULY/AUGUST 2017
Earliest Evidence for Aboriginal Coastal Occupation
A team of international archaeologists has conrmed evidence Veth said the location provided the longest sequence of dietary
from a remote cave in Australias north-west that pushes back remains from any Australian site. The cave was used predomi-
human occupation of Australia to around 50,000 years ago. The nately as a hunting shelter between about 50,000 and 30,000 years
discovery provides one of the earliest age brackets for the settlement ago, before becoming a residential base for family groups after
of Australia, and also documents the longest record of dietary 10,000 years ago. It was abandoned by about 7000 years ago when
fauna, providing unprecedented insights into the lives of the earliest rising sea levels nally cut it off from the mainland, he said.
Australians.
Lead archaeologist Prof Peter
Veth of The University of
Western Australia said the nd-
ings, published in Quaternary
Science Reviews, provided unique
evidence for the early and
successful adaptation of Aborig-
inal people to both the coastal and
desert landscapes of Australia.
This site contains cultural
materials clearly associated with
dates in the order of 50,000 years,
Veth said. This pushes back the
age of occupation from the
previous and more conservative
limit of 47,000 years ago. Even
older dates are entirely plausible.
The team focused on Barrow
Island, a large limestone island
located 60 km off the Pilbara coast Prof Peter Veth at the excavation site on Barrow Island.
of Western Australia. The large
cave on Barrow Island provided rich records of ancient artefacts, Our current research at Barrow Island has provided the earliest
gathering and hunting of marine and arid animals, and environ- evidence of coastal living in Australia. Remarkably, the early
mental signatures which show the use of a now-drowned coastal colonists of the now-submerged North-West Shelf did not turn
desert landscape if you like an Atlantis of the South, Veth said. their back on the sea or remain coastally tethered, but rapidly
We know about old desert sites from the Northern Hemisphere, adapted to the new marsupial animals and arid zone plants of the
but few have these extraordinary dietary records. extensive maritime deserts of north-west Australia.
JULY/AUGUST 2017 | | 11
Researchers Estimate
Maximum Growth Rate
for Life on Earth
Research presented at the Astrobiology Science
Conference in Arizona has challenged assumptions
about how microbes behave at high temperatures. The extinct megapode Progura (right) may have roosted in trees.
Credit: Elen Shute, Flinders University, from photos by Kim Benson, Tony Rodd and Aaron Camens
Its common knowledge that microbes grow at a
faster rate at higher temperatures, such as the everyday
example of milk going off when its left out of the Kangaroo-Sized Flying Turkey
fridge. However, Dr Ross Corkreys laboratory at The
University of Tasmania last year discovered that the
Once Roamed Australia
maximum rate of microbial growth plummets A giant ying turkey as tall as a kangaroo is among ve extinct large megapode
dramatically once temperatures reached somewhere birds discovered by palaeontologists at Flinders University. All ve birds were
chunky relatives of todays malleefowl and brush-turkeys, but the giant
above 40C. This distribution of growth rates was termed
brush-turkeyProgura gallinacea, which was as tall as a grey kangaroo, soars
the Biokinetic Spectrum for Temperature (BKST).
above the others.
Building on this work, the team has now quantified
After carefully comparing megapode fossils from Queensland, New
the data and provided an estimate on the maximum
South Wales, South Australia and Western Australia, the researchers
growth rate for life on Earth. We now find that the concluded that the remains belong to ve different extinct species ranging
predicted maximum growth rate occurs at 45.8C, with from 3 kg to 8 kg in weight up to four times the size of a modern malleefowl
an estimated minimum generation time of 5.16 minutes. (2 kg). The big birds lived during the Pleistocene alongside Australias giant
This means that the shortest possible time in which a extinct marsupials, such as diprotodons, marsupial lions and short-faced
cell can divide to make two daughter cells is a little more kangaroos.
than 5 minutes, Corkrey said. We are now considering Given several of the largest birds to have lived in Australia in recent
how this limit may influence ecological processes that times have escaped detection in the fossil record until now, our research
vary by temperature, including, perhaps, those of marine shows how little we know of Australias immediate pre-human avifauna.
plankton. Probably many smaller extinct species also await discovery by palaeontol-
To arrive at the numbers, the team collated more than ogists, said A/Prof Trevor Worthy.
10,000 measurements of growth rates representing The extinct megapodes include the tall turkeys in the genusProgura,
1627 microbe strains. We mathematically modelled which had long, slender legs, and the nuggety chickens with short legs
them to obtain the predicted maximum rate of growth and broad bodies, for which the new genusLatagallina has been created.
versus temperature for any life on Earth, Corkrey said. It seems that none of these giant megapodes built mounds like their
The vast bulk of the BKST describes growth rates for living Australian cousins because they lacked the large feet and specialised
most of life, but there are still deviations at claws seen in mound-builders. Its more likely that they buried their eggs in
temperatures below 0C and above 100C.This could warm sand or soil, like some living megapodes in Indonesia and the Pacic.
mean that the growth rate drops due to some unknown Unlike many large, extinct birds, such as dodos, these megapodes were
property, perhaps such as changing bulk properties of not ightless. While big and bulky, their long, strong wing bones show they
water, like diffusion of molecules at low temperatures, could all y, and probably roosted in trees.
and at high temperatures the deviation may be due to an The latest ndings have been more than a century in the making. The
increasing degree of denaturation and degradation of rst giant megapode species was described from Queensland in the 1880s,
biomolecules, Corkrey said. and another slightly smaller species was described from South Australias
Naracoorte Caves in the 1970s.
Alternatively, it could mean that there are organisms
Since then, the status of the two species has been questioned, and it had
that grow slowly at these temperatures that are
been suggested that they were only one species that later dwarfed to become
undiscovered.
the modern malleefowl. The new evidence shows that this no longer stacks
It is notoriously difficult to grow organisms at low
up.
temperatures, so it would not be surprising if we have
We compared the fossils described in the 1880s and the 1970s with
not found them. These would be organisms that still specimens discovered more recently, and with the benet of new fossils,
grow slowly compared to more familiar forms of life, but differences between species became really clear, said PhD candidate Elen
much faster than those we so far know about. Perhaps Shute.
they would be found in glacial ice. Similarly, it is possible The two species that were originally described are so different that they
that there may be relatively fast-growing organisms belong in separate genera. These and three more new species were all more
growing in hydrothermal vents at the bottom of the sea. closely related to each other than they are to the living malleefowl.
The team is now exploring how the growth limits of Whats more, we have found bones of malleefowl in fossil deposits up
life depend on other conditions such as acidity and salt to a million years old, alongside bones of three extinct species of various
concentration. sizes, so theres really no evidence that dwarng took place.
Wine Labels Influence
Drinkers Palates
Wine descriptions can alter consumers emotions,
increase their enjoyment of wine and encourage
them to pay more for a bottle, according to a study
published inFood Research International.
The importance of wine labels and label infor-
mation has been widely studied, and its been clearly
shown that they represent useful information which
inuences consumer choice, says project leader
A/Prof Sue Bastian of The University of Adelaide.
Our study extends these ndings, showing that
wine descriptions also inuence our whole wine
consumption experience.
karelnoppe/Adobe
JULY/AUGUST 2017 | | 13
Mopic
/Adob
e
Gene Drives:
A way to genetically
engineer populations
CHARLES ROBIN
Gene drives occur when a bias in the mechanism of inheritance spreads particular genetic
variants through a population. Developments in gene-editing technology now make it possible
to construct gene drives that address problems in health, agriculture and conservation.
he concept of gene drives has been around for through populations. They are a form of genetic engineering but,
14 | | JULY/AUGUST 2017
Natural Gene Drives
Under the Mendelian view of inheritance,
the organisms of interest have two copies
of each gene, one derived from each parent.
The two versions are called alleles. These
organisms are sexually reproducing, and
when the males produce sperm (or pollen)
or the females produce eggs (or ovules),
Mendels law of segregation says that the Mendelian versus gene drive inheritance. (a) A diagram showing the inheritance of a
dominant trait (black body colour) in a mosquito pedigree. The two alleles are
two alleles will separate into different cells. represented below the mosquitos (each allele is a dot on two lines representing double-
Now focus on a female animal and call stranded DNA). Half of the progeny are black and half white. (b) Inheritance in a synthetic
gene drive where the black alleles convert the white alleles to black early in development
the two versions of a gene that she carries so that all progeny have the black phenotype. The green outline symbolizes bearers of
allele 1 and allele 2. The expectation is the synthetic gene drive construct. The conversion is represented by a red arrow and
involves the CRISPR/Cas9 complex cutting double-stranded DNA, which is then repaired
that half her egg cells will carry allele 1 and by the black allele. The synthetic gene drive element encodes blackness as well as
half will carry allele 2. When a fertilisa- sgRNA and Cas9.
tion event occurs, the chance that allele 1
is sampled is 50% just like ipping a coin.
If she has many progeny, approximately In essence, gene drives result from tinkering with
half will bear allele 1 and approximately the mechanisms of inheritance so that particular
half allele 2.
There is some variation around our
gene elements spread through populations. They
expectation of a 50:50 inheritance, the are a form of genetic engineering but, rather than
same as if you would not be surprised if engineering a single individual, breed or plant
you ipped a coin 20 times and got nine
variety, they modify free-breeding populations.
tails and 11 heads. However, if the coin
was not fair because one side had been
weighted, then one outcome would be ways to cheat the inheritance system, lation was well ahead of what was actu-
systematically favoured. although many are not completely under- ally possible. However, two recent
The same can happen in biology. Some- stood. advances make synthetic gene drives a
times inheritance shows non-Mendelian Studies of natural systems acting in realistic prospect.
patterns, instead exhibiting segregation anomalous ways spark the imagination of The rst advance is a revolutionary
distortion so that one allele is favoured scientists and make them ask: What if?. gene-editing technology known as
over others. Gene drives rely on such an They also help us to understand the CRISPR/Cas9, which enables targeted
inheritance bias. bounds of what is possible. What if we alterations to the DNA of complex organ-
A classic example of segregation distor- could deliberately bias inheritance isms. Essentially the CRISPR/Cas9 gene-
tion occurs in mice, where the t-haplo- patterns? Could we use such manipula- editing technology allows the DNA of
type allele is preferentially passed on. In tions to drive genes encoding specic func- an organism to be cut at a determined
this particular example there is a twist to tions through populations? Could they site while its still in the living cells of that
the story because the t-haplotype allele is be used to deal with pests that spread organism. The cell will repair the cut
maladaptive. Mice that carry two t-haplo- human disease or wreak havoc in agricul- DNA. If another piece of DNA similar
type alleles have major developmental tural systems? This last question, at least, to that which has just been cut is
defects or are sterile. Despite this, a gene motivated the development of theoretical provided, then that piece of DNA can
drive favours the t-haplotypes when it is models of gene drives that manipulate the be patched-in during the repair process.
rst introduced into a population. genetic constitution of populations and The patched DNA can encode a single
Thus these selsh genes cheat the the abundance of pest populations. nucleotide alteration or several genes.
inheritance system in some way. In the The reason why the CRISPR/Cas9
case of these mice, sperm carrying the t- Gene Editing: technology is so revolutionary is the ease
haplotype allele somehow kill the sperm A Disruptive Technology with which the cutting sites can be spec-
that do not have that haplotype. Other Until recently the theory of the spread ied and the simplicity of the necessary
natural systems tell us that there are various of gene drive elements through the popu- components. Only two components are
JULY/AUGUST 2017 | | 15
Instead they were excited about the
prospect of converting heterozygote indi-
viduals (who have two different alleles)
into homozygotes (both alleles become
the same). If the maternally inherited
allele could convert the paternally inher-
ited allele then it would, for instance, be
much easier to determine gene function,
because both alleles would be equally
affected.
If this allelic conversion could happen
with 100% eciency then all progeny in
the next generation would receive the
engineered construct. This would happen
again in the next generation, and the next,
until the synthetic gene drive spreads
through the entire population.
There is one further component that
varies depending on the gene drive appli-
cation. The idea is that the synthetic gene
drive construct will also carry cargo: a
useful gene that the genetic engineer
wants to spread through a population of
the target organism. For example, a gene
A crystal structure showing the Cas9 endonuclease protein (dark blue barrels and
that blocks Zika virus replication could
interconnecting threads) wrapped around the small guide RNA (light blue) and target be spread through mosquito populations.
DNA (white). The sgRNA and the target DNA form a twisted ladder, with the rungs
representing sequence-specific base-pairing. REC1, REC2, RuvC and PI are names given
Its important to note that gene drives
to different domains of the Cas9 protein. Credit: Hiroshi Nishimasu, F. Ann Ran, Patrick D. Hsu, Silvana Konermann, only work in sexually reproducing organ-
Soraya I. Shehata, Naoshi Dohmae, Ryuichiro Ishitani, Feng Zhang and Osamu Nureki
isms, so they will not work on clonally
reproducing organisms (e.g. some aphids,
required to create the scissors that cut elegantly simple. They encode the instruc-
many plants). They also work on a time
DNA. The rst is the Cas9 endonuclease tions to cut DNA at a place in the genome
span of generations. Unlike viruses that
protein, which is an enzyme that uses the that will be repaired by themselves.
spread horizontally between poten-
second component: a small guide RNA Specically, a construct would consist
tially unrelated individuals in a popula-
(sgRNA) to determine where the cut of:
tion, gene drives are only spread down
should occur. The specicity is deter- a sequence of the target gene to aid
the generations, from parent to child. So
mined by making use of the ability of the the stitching in of the patched
RNA to bind to DNA with the comple- sequence; gene drives will not work quickly on
mentary code. DNA encoding the Cas9 endonu- organisms that take years to be repro-
To edit an animal genome, Cas9 clease; ductively mature like elephants, humans
protein and sgRNA can be injected into DNA encoding sgRNA that comple- or trees.
eggs. As this does not have a 100% success ments the target gene; and Of the many organisms and contexts
rate, many individuals that develop from more of the target gene to be used as where gene drives could conceivably be
injected eggs, or more likely the progeny template for repair. used, are there hazards that we should
of those individuals, are then screened to The constructs are also designed so consider? Is it ethical to tinker with
see if the desired gene has been altered. that the Cas9 is active during the devel- natural populations in this way?
The second advance was the realisation opment of eggs or sperm. The rest of this edition of Australasian
that it is possible to design gene-editing The rst people to design such a Science considers these and other questions.
constructs that give themselves biased construct were not motivated by the Dr Charles Robin is a Senior Lecturer at The University of
Melbournes School of Biosciences, and Guest Editor of this
inheritance. Such constructs are also prospect of population engineering. series of articles on gene drives.
16 | | JULY/AUGUST 2017
Driving
Mosquitoes
out of
Town
JACK SCANLAN
JULY/AUGUST 2017 | | 17
nechaevkon/Adobe
These techniques can control diseases like malaria in areas
National Library of Medicine - History of Medicine
18 | | JULY/AUGUST 2017
wisann
umkarn
g/Ado
be
Mosquitoes are becoming increasingly resistant to insecticides. Computer models suggest that even if gene drives dont eliminate
mosquito-borne diseases completely, they may be able to reduce them enough to raise the effectiveness of existing control strategies.
tant mosquito vectors, and applications of the CRISPR/Cas9 The implications of removing an
tools that will form the gene drive itself are becoming increas-
ingly sophisticated.
entire mosquito species from an
There are two ways a gene drive could be used to target ecosystem arent clear, and
mosquito-borne diseases: to eliminate populations of mosquitoes discussions about the ethics of such
completely in disease-ridden areas, or to genetically alter
an action are also ongoing in the
mosquitoes so they cannot transmit the disease in the rst place.
The former could be done by spreading a gene that makes one scientic community.
sex infertile, shrinking the population as the gene drive moves
through it, while the latter could borrow tricks from Wolbachia
and change how the mosquito interacts with the virus or para- scientists published the rst description of a female-sterility
site it carries. gene drive in the malaria vector Anopheles gambiae, and last
Eliminating a population is, from a technical perspective, a year another gene drive in the same species was developed that
lot easier than removing vectoring capacity. Many of the genes results in only male progeny. Neither has been, as yet, cleared
involved in fertility are well-studied in insects; the genes that for use outside of a laboratory environment.
control how the mosquitos immune system ghts the diseases Unfortunately, a thorn may be waiting to plant itself in the
they carry are not. But such sterility gene drives could spread side of gene drive researchers: evolved resistance. High genetic
from local populations to every population of a species, killing diversity in mosquito populations could hamper the spread
it off completely. The implications of removing an entire of gene drives, which rely on DNA regions with perfect or
mosquito species from an ecosystem arent clear, and discus- near-perfect similarity between individuals. This is similar to
sions about the ethics of such an action are also ongoing in the how insecticide resistance evolves over time, entire popula-
scientic community. tions could shrug off the gene drive, rendering it useless.
Removing vectoring capacity from mosquitoes would bypass Successful applications of gene drive technology may have to
this problem, as the populations would stay intact. And the nd ways to take this into account, lest the researchers be back
lack of a negative impact on the mosquitoes would also mean to the beginning.
the gene drive would spread through populations faster. But There is still a long way to go until gene drives could be used
the interplay between parasites and their insect hosts is not to stop diseases like malaria and dengue fever once and for all.
fully understood, so progress on developing such a blocking Even if a useful gene drive is developed, its possible that govern-
drive would be a lot slower compared to a sterility drive. Its ment policy may block them from ever being used at all. The
still unclear which type of drive would be better in the long severity of the diseases at hand, however, at least warrants a
term. discussion of all available options. The human toll is far too
Despite these issues, many research teams around the world great to ignore.
are working to develop gene drives in mosquitoes. In 2015, Jack Scanlan is a PhD candidate in insect genetics at The University of Melbourne.
JULY/AUGUST 2017 | | 19
Gene drives could make cane toads non-toxic, enabling predators to consume the toads safely and reduce their numbers.
Gene Drives
for Conservation
ELLA KELLY
Gene drives may provide a novel tool to counteract seemingly unstoppable threats to global
biodiversity.
he global environment is not spread rapidly enough through popu- tions to threats or spread favourable genes
20 | | JULY/AUGUST 2017
isolated for so long that its now ill- eliminating them with little negative the population non-toxic. Then, preda-
adapted to deal with novel threats. effect on the unique fauna of the island. tors would be able to consume the toads
Current methods for control generally Gene drives have also been suggested safely, and could help us in bringing down
involve individual removal through tech- to help control the poisonous cane toad, their numbers.
niques such as lethal baiting, or the intro- which is currently spreading across Invasive species are not the only threat-
duction of diseases such as myxomatosis northern Australia at an alarming rate, ening process impacting Australias biodi-
in rabbits. Even though these methods leading to local population crashes of versity, and gene drives may have other
can be effective on a small scale, invasive native predators that unwittingly attack potential uses for conservation. There
species continue to pose a signicant the poisonous toads. Unfortunately, are adaptations occurring in the natural
threat to native Australian fauna. current methods have not been able to environment in response to many threat-
Gene drives provide a novel avenue stop the invasion, or effectively remove ening processes, but often they do not
for conservationists, and could be used the toads once they are established. With spread quickly enough to allow for popu-
to either control invasive species or
promote adaptations that allow native
animals to coexist alongside invaders.
Due to the targeted nature of gene drives,
conservationists could specically target
feral animals and have little effect on the
native fauna (unlike other control
methods such as baiting, which run the
risk of poisoning native animals that
unknowingly consume baits).
The speed at which gene drives work
within a population would also be to
conservationists advantage, as invasive
species often spread so quickly that tradi-
tional management efforts cannot
prevent the damage they cause.
There have been suggestions to use
gene drives to reduce populations of inva-
sive rodents in Australia. By targeting the
masculinising Sry gene, scientists could
articially increase the number of male
offspring born in problem populations.
This would reduce the populations
breeding output, ultimately leading to Rabbits at the myxomatosis trial enclosure on Wardang Island in 1938.
National Archives of Australia: barcode 11145789, series accession number A1200/19
declines in rodent numbers and possibly
resulting in their extinction. current control methods mostly ineffec- lation survival. Take, for instance, the
Lord Howe Island was invaded by the tive, researchers have highlighted the Tasmanian devil, which is being seriously
black rat in 1918, and this invasive rodent potential for new molecular technolo- threatened by the spread of the deadly
has been implicated in the decline of gies to enable specic gene editing of the facial tumor. Although devil populations
several native bird species and the extinc- cane toad. By targeting the pathway to have reduced by over 80% in the wild
tion of ve species. Traditional methods toxicity in the cane toad, researchers could since the disease rst appeared less than
for removal, particularly baiting, have so limit the damage the toads have on native 20 years ago, recently we have had cause
far provided some reprieve for the native populations. This would require a rela- for hope. Researchers in Tasmania have
ecosystem, but have proved costly and tively simple synthetic gene drive, with discovered genomic regions associated
havent completely eradicated the rats no cargo attached. Using gene drives with immune-modulated resistance,
from the island. The use of gene drives to promote and help spread the gene which potentially is being selected for
in this instance would help to reduce the through the cane toad populations, we and enabling some devils to survive.
number of black rats, perhaps eventually could theoretically make all members of Although its still very early days, there
JULY/AUGUST 2017 | | 21
An introduction of new
22 | | JULY/AUGUST 2017
The Future of
Pest Control
Lies Within
(the Pest)
be
do
/A
va
ro
se
lva
tte
Ku
ra
Ve
ALEXANDRE FOURNIER-LEVEL
Gene drives could improve global food security by turning pest biology against itself.
etween 1845 and 1847, the potato blight (Phytoph- tend to favour short-term chemical answers to long-term biolog-
JULY/AUGUST 2017 | | 23
conditions and connected to other agricultural zones around the
world. This provides the perfect trigger for a demographic explo-
sion by an organism capable of exploiting the agrosystem.
So will any genetically engineered species released in an open
eld necessarily escape human control? While the purpose of a gene
drive is to spread, escape could be limited if the means of control
has been carefully anticipated. Since the activity of a gene drive
strictly depends on the presence of the Cas9 endonuclease gene,
it is possible to introduce small guide RNA sequences (sgRNAs)
aimed at deleting the Cas9 gene itself. Once Cas9 is expelled from
the genome of the target species, there is no risk of the gene drive
multiplying out of control.
For this strategy to be effective, the initial gene drive must only
be effective for a certain period before the second, anti-Cas9
sgRNA disrupts the gene drives activity. This remains a chal-
lenge, but progress in our understanding of gene regulation, such
as epigenetic modication, may soon allow the delay of anti-Cas9
Pathogenic fungi such as rice blast (Magnaporthe grisea)
threaten food security in many parts of the world. Credit: Donald Groth activity relative to the primary drive.
However carefully designed the gene drive is, it cannot be ruled
neering tools inside the pest cell. Second, we need a way for the out that a molecular error will be introduced, and its consequences
engineered gene to diffuse across the pest population. are dicult to anticipate. We typically should remind ourselves
This is now possible through the development of synthetic that the abundance of genetic diversity present in the living world
gene drives using CRISPR/Cas9 molecular engineering tech- is entirely the result of errors and malfunction of the cellular
nology. This technique represents an unprecedented possibility machinery, and this imperfection is the driver of evolution.
of bringing a genetic conict to a noxious organism simply through Nevertheless, gene drives have a critical advantage over biolog-
the introduction of a single non-native gene, the Cas9 endonu- ical control using another species: since the arena lies within the
clease gene, into the genome of the target pest. This is in stark genome of the pest species, there is no risk of introducing a new
contrast to other biological control approaches that introduce pest. An optimistic standpoint would just consider that, at worst,
new species into the ecosystem. the gene drive may not solve the initial problem. The possibility
In theory there is no limitation to which gene or genes can be of the gene drive escaping through hybridisation remains to be
the target of a gene drive. The targeted gene can be simply deleted considered, but fortunately most pests are not native and are rarely
(the most simple and straightforward application), added or at risk of hybridising with sister species.
edited. The gene drive will then convert the other gene copy or As a result of our over-reliance on a few all-purpose pesticides,
allele present on the sister chromosome into the engineered form pests have become resistant and the dose used has needed to be
of the gene, and multiply it through the population. increased to the point where most elds and ecosystems have
A gene drive can have different objectives, from simply become highly polluted. This is not the fault of the chemical
amending the genetic make-up of a population (e.g. by intro- industry, and even less the farmers; it is the fault of applying simple
ducing susceptibility to a pesticide or a reproductive incompati- solutions to complex problems.
bility) to the extinction of a target species (a crash drive). In Gene drive technology will create new opportunities and will
terms of ethics, designing a gene drive to restore susceptibility to be informed by emerging models where biological interactions
a pesticide for which the pest has developed resistance seems more are considered down to the molecular level. Each pest issue could
acceptable than seeking its extinction. be tackled in the most specic possible way, without harm to
Nevertheless, the complexity of biological ecosystems and our other species. We may no longer need to have xed varieties of crops
lack of understanding should make us very humble: numerous and breeds of livestock, but instead could use locally adapted,
things could go wrong when using a gene drive for pest control, better-suited plant and animal populations in which we occa-
and we will rst need to close the knowledge gap before consid- sionally introduce a new benecial copy of a gene that will diffuse
ering any eld release. through a gene drive. This is the way forward to reconcile produc-
Agricultural systems have all the features that could lead to tive agriculture and maintenance of biological diversity.
the rapid diffusion of an escaping biological agent: massive areas Dr Alexandre Fournier-Level is a Lecturer at The University of Melbournes School of
with high densities of a single species in favourable environmental Biosciences.
24 | | JULY/AUGUST 2017
Gene Drives:
A Fork in the Road
for the GMO Debate
CHARLES ROBIN
What are the moral and ethical concerns about gene drives,
and how should the technology be regulated?
honglouwawa/Adobe
t the end of last year, a United Nations biodi- Generally, however, it seems unlikely that a gene drive
This raises two very important issues. What are the moral ... if New Zealanders developed a
and ethical issues? And in what way should the technology be gene drive to reduce pest
regulated? populations of the brushtail
Synthetic gene drives can be thought of as a derivative of
conventional genetically modied organisms (GMOs), for
possum, how would we make sure
which many of the moral and ethical issues have already been that the gene drive would not
widely debated and the technology highly regulated in many spread to Australia?
countries. So let us focus on the differences between gene drives
and GMOs, and ask where the moral and ethical threshold The most fundamental differences between gene drives and
actually lies. standard GMOs is that gene drives affect free-living and free-
Unlike the early releases of transgenic plants, gene drive breeding natural populations and are designed to spread. This
technology is not currently being championed by private compa- is not the case with transgenic cotton or herbicide-resistant
nies with a prot motive. In fact, it is not immediately obvious canola, where there is an imperative not to spread the trans-
how gene drives can be monetised given that they are self- genes to GM-free cultivars in a neighbours paddock or to any
spreading. weeds with the potential to hybridise with the crop plant. In the
One possibility is that gene drives could be coupled to agri- case of these GM crops there have been substantial efforts to
chemicals. For example, a gene drive could spread a gene that prevent such movement (such as making the GM crops sterile)
makes a pest sensitive to a particular patented chemical that is and to monitor related crops to detect any possible gene ow
sold by that company. Another possibility is that companies that may have occur. However, organic farmers need not be
follow the lead of British biotechnology company Oxitec, which concerned about gene drives, in this respect, because its likely
has developed sterile insects using transgenic technologies and that gene drives will target pests rather than the crops themselves.
manages release strategies for various tiers of government so So should the threshold be set so that no gene drives are allowed
that disease vectors are controlled. because genetic engineering of a natural population is a step too
JULY/AUGUST 2017 | | 25
far? Will, then, alternatives such as the broad application
of relatively indiscriminate insecticides remain our default
strategy?
Perhaps the threshold should discriminate between
particular types of drives. Maybe gene drives that simply
knock out gene function are tolerable whereas those
that deliver cargo genes are not. Or perhaps those aimed
at conferring a new attribute to the population are
acceptable, whereas those that aim to reduce the number
of individuals in a population size are not?
Some have talked about deliberately eliminating
pest species, like mosquitoes, using a variant of gene
drives sometimes referred to as crash drives. Is reducing
species biodiversity in such a way a step too far?
If we accept that some gene drives are acceptable,
then what are the hazards of tinkering with the genetic
constitution of natural populations? One major concern
is that gene drives could drastically affect ecosystems,
and because ecosystems are complex the consequences
Drosophila suzukii is a pest of soft-skinned fruit in many parts of the world.
It is not in Australia yet, but if populations of it appeared to be establishing may be hard to predict and the outcomes unexpected
then a gene drive could help eradicate it. For example, a gene that ensures and devastating.
that no daughters are born could be driven through the population. While
this may increase the number of male flies in the short term, males do not Perhaps we should limit gene drives to organisms
strike the fruit, and would increasingly be fathers of subsequent that have recently invaded Australia. For instance, the
generations, so ultimately females will disappear and the population would
crash. Credit: Kathy Garvey, UC Davis
tomato and potato psyllid (Bactericera cockerelli) recently
entered Western Australia and has been the target of
interstate quarantine restrictions. Drosophila suzukii,
The green peach aphid (Myzus a small fruity, a major pest of soft-skinned fruits like
persicae) is a major pest of canola. berries, has caused signicant damage in the United
Australian populations mostly
reproduce asexually, so its not a States and Europe, where it has recently invaded. Incur-
good target for a gene drive. sions of Drosophila suzukii into Australia are expected
soon. Both of these insect species reproduce sexually, so
they could be the targets of gene drive technology.
Surely elimination from Australia of pest incursions
using a crash drive will protect ecosystems rather than
damage them?
But that introduces a new issue. How do we stop
gene drives spreading to places where they are not
intended? Would a gene drive designed to protect
Australian agriculture spread overseas? Pest organisms
do not carry passports or recognise national bound-
aries, and a pest in one country may be a key part of a
fragile ecosystem in another.
As a completely hypothetical example, if New Zealan-
ders developed a gene drive to reduce pest populations
of the brushtail possum, how would we make sure that
the gene drive would not spread to Australia? It would
only take the movement of one fertile animal by some
irresponsible person.
Several engineering solutions to this problem have
Credit: Scott Bauer, US Agricultural Research Service been suggested. For example, more sophisticated gene
26 | | JULY/AUGUST 2017
The tomato and potato psyllid Bactericera cockerelli
feeds on a potato and infects it with Candidatus
Liberibacter solanacearum, the bacteria that causes
zebra chip disease. This pest has already entered
Western Australia and could be a target of gene drives.
Credit: Whitney Cranshaw, Colorado State University, Bugwood.org
JULY/AUGUST 2017 | | 27
Its not just about
The Science
RACHEL A. ANKENY & HEATHER J. BRAY
Female scientists and health professionals have revealed that
opposition to genetically modied food is less about the science
and more about perceived conicts with personal values.
28 | | JULY/AUGUST 2017
Mopic/Ado
tant. Price, familiarity of brands, allergies and other women in our study, with some growing their own food,
other special dietary needs were also cited as and talked about their concerns about the environmental
important factors when choosing food. impacts of their food purchases.
Although all of the women with higher levels Our study reinforces other research that challenges the decit
of science education used evidence to support model of science communication. It shows that high levels of
their positions on science education and knowledge do not necessarily generate
whether to consume more acceptance of technologies, particularly genetic modi-
GM foods, they had very cation of foods and crops.
different perceptions of risk. Although it may not be surprising that women working on
These are likely to result from the the development of GM crops were mostly in favour of GM
womens different disciplinary back- foods, our ndings reveal new information about how scientic
grounds. The plant scientists said that information is being used by women with different types of
lack of evidence of harm meant that science backgrounds to make everyday decisions. The contrast
GM food was safe for them to eat, but between women with health/nutrition backgrounds and those
the women in health sciences said that a with molecular biology backgrounds in their use of evidence
lack of evidence of safety made them is particularly notable: they took different approaches to risk,
cautious. For women without high levels of respectively stressing a lack of evidence of safety and a lack of
science education, GM foods presented evidence of harm. This difference reinforces the idea that knowl-
unknown risks, and as such were to be avoided. edge alone does not shape views on GM food, but that eviden-
Regardless of discipline, all of the women tial standards and other values are critical.
with high levels of science education viewed GM As researchers keen to foster engagement around the role
foods and crops in terms of broader issues in of science and technology in food production, we feel that this
agriculture and food production rather than research provides several critical lessons for scientists and others
focusing on the science of how GM crops are seeking to engage with the public.
produced. First, everyday decisions that involve science do not occur
For the plant scientists, support of the tech- in a vacuum; further, the multiple roles that each of us plays also
nology was linked to its potential to do social inuence our choices.
good or support environmental sustainability. Second, there is no singular body of knowledge called
They suggested that education was part of the science with which people engage. Helping people to navigate
solution to public perceptions of GM crops, different disciplinary approaches to risk is particularly dicult
particularly because they viewed GM as an exten- yet important.
sion of the long history of human manipulation Third, one of the negative consequences of the decit model
of plants. has been to limit conversations about GM foods to how they
The health scientists emphasised the idea that are made, what is in the nal product, and how risk is assessed
the risks were unknown, in part because our by regulators, rather than discussion of broader issues such as
understanding of molecular biology continues how this technology ts within economic, social and political
to evolve (e.g. epigenetics). The fact that no inde- domains. The tendency to adopt this type of simplistic framing
pendent safety testing of GM foods is required was particularly frustrating for the women in our study with
for approval in Australia was also problematic for science backgrounds. They expressed their desires for much
them. They also expressed other concerns about more sophisticated conversations about GM food than those
GM, including the effects on farmers abilities to currently taking place in the public domain, particularly in the
save seeds for reuse, the involvement of large corpo- context of our evolving understandings of molecular biology.
rations, and environmental impacts from the use Most importantly, our research points to food values that are
of agricultural chemicals in farming systems. shared whether women eat or avoid GM foods. Shared values
These ndings highlight that both product (what are an important foundation for engagement, and we believe that
is in the food) and process (how it is made) are impor- our work can contribute to the development of better engage-
tant for the women in our study, although Australias ment strategies across different sciences and sectors of the
current labelling regime doesnt mark out the latter cate- public.
gory with regard to GM use. The women in plant sciences Prof Rachel A. Ankeny and Dr Heather J. Bray are part of the Food Values Research Group
in the School of Humanities at The University of Adelaide (https://arts.adelaide.edu.au/
were as concerned about making good food choices as the history/food-values/).
JULY/AUGUST 2017 | | 29
obe
Tasty Treats Diminish Our
Capacity for Patience
/Adobe
tawanlubfah
BOWEN FUNG
A new study nds that our recent experience with rewards such as food can change our
capacity for patience.
n everyday life, we often make change signicantly over the course of when the bus will arrive. You are probably
30 | | JULY/AUGUST 2017
tations. If Im used to a ecient public slightly sooner on average. In terms of chosen to keep waiting. In the case of the
transport system Im going to be less the bus stop scenario, this was equivalent rst manipulation (when we delivered
tolerant of delays, but if I move to a city to having an arrival timetable with a the rewards sooner), we not only changed
with poor public transport I might higher frequency, so these participants our participants expectation of when the
(unhappily) wait longer for a bus. should expect the large reward to arrive large reward would arrive but we also
My laboratory and I set out to test quicker. This also meant that these partic- increased the potential amount of money
exactly how people behaved in situations ipants could potentially earn more money they could be earning per unit time. This
like this, and what kinds of factors might in total. meant that their time was inherently
make them more or less likely to persist For the second manipulation, half the more valuable, and every second spent
in waiting. participants drank a sweet beverage (very waiting was more costly than the partic-
In our study, published in Proceedings of similar to a normal soft drink), while the ipants who had their large rewards
the Royal Society B (http://tinyurl.com/ other half just drank water. Although arrive later. It is likely that this sense
yd8soa84), we asked participants to avoid this was irrelevant to the computer task, of increased opportunity cost made
eating or drinking for 4 hours, and then it meant that half of our participants had participants give up sooner.
asked them to complete a computer task
Kitty/Adobe
that was similar to the bus stop scenario.
Instead of buses, participants waited for a
monetary reward (that they were actually
paid), but they could give up waiting at any
time. If they gave up, they received a much
smaller reward. Whenever they won money
(either the large or small amount), the task
was reset, and the time they would have to
wait for the large money reward to arrive
would be randomly shued. We gave
participants a xed amount of time to earn
money in this task, using whatever strategy
they wanted.
Imagine one extreme strategy that
people might have used: continuously
taking the immediate, smaller reward.
While this would ensure a constant cash
ow, it meant always missing out on a
larger amount of money (which was
substantially greater).
The study found that the consumption of calories reduced the patience of participants.
The opposite extreme strategy would
be to wait for the larger money reward
every single round. However, for some the experience of being physiologically But what about the participants given
rounds this could take averylong time, rewarded while the other half remained the soft drink? The drink was unrelated
during which participants wouldnt be hungry. to the task of earning money, yet despite
getting any money at all. Thus the key to We found that for both of these exper- this, drinking it still affected participants
earning the most money was to give up imental manipulations the participants willingness to wait for rewards.
when they thought they had been waiting gave up waiting earlier. But why should One suggestion is that our perception
too long, because the large reward might that be the case? of opportunity cost is sensitive to all types
come much quicker in the next round. One likely explanation relates to the of rewards, even those that are irrelevant
We experimentally manipulated two concept ofopportunity cost.This gener- to the task at hand. When our hungry
factors to see whether they would affect ally refers to the value of forgone oppor- participants drank the energy-providing
how long participants were likely to wait tunities in our task, this was the soft drink, a general psychological mech-
in this task. First, for some participants we potential money that participants might anism may have signalled that rewards
delivered the larger monetary reward have been able to earn if they hadnt were now readily available in the envi-
JULY/AUGUST 2017 | | 31
ronment, and that waiting now carried expose them to the kinds of food cues and and they also act more quickly and vigor-
a higher opportunity cost (the cost of not brands that we regularly experience in ously. This makes sense because wasted
nding more to drink). If humans are supermarkets. Another possible explana- time is more costly in these situations,
indeed sensitive to irrelevant rewards in tion for this counterintuitive nding is that and acting faster offsets this cost. While
the environment, then this implies that when we are reasonably condent of we didnt measure dopamine levels in
reward-rich environments like casinos receiving food (e.g. if weve just ordered at our participants, its possible that the
may make us more impulsive simply by a restaurant), we would prefer to wait rather same neurobiological mechanism can
increasing our general sense of opportu- than waste valuable energy trying to nd explain our results.
nity cost. food elsewhere. Interestingly, increases in dopamine
also affect our perception of time. When
javarman/Adobe
32 | | JULY/AUGUST 2017
Ruling the Roost
While there has been a huge effort to try and sanitise the processing of chicken
meat to eliminate bacterial contamination, they still persist in low numbers. roibu/Adobe
ts a story that will be familiar to many of us. Possibly Bacteria are responsible for the majority of food poisoning
JULY/AUGUST 2017 | | 33
litigation. Indeed food poisoning victims in
the United States have now started pointing
the nger at the primary producers in addi-
tion to the eateries from which they fell ill.
In order to reduce the risk of bacterial
food-borne illness there is a necessity to
reduce the original bacterial levels in meat
chickens prior to processing. The lower the
numbers of these bacteria at the beginning of
the process line, the easier it will be to
minimise the bacterial levels at the end of
the process.
A great deal of work is now being done
in an attempt to reduce the continual bacte-
rial infection and re-infection that occurs
roibu/Adobe
during the movement and processing of
chicken meat. Efforts include increasing
Chickens need to be free of antibiotics before processing to ensure there is no trace
of them in the chicken meat. awareness, improving sanitation,disinfecting
and improving farm management practices.
do not affect the health of the animals. Its when they make While these efforts will go some way to limit the spread of food
their way into our gut that problems arise. However, during poisoning bacteria, they dont deal with reducing the original
the process of producing chicken meat its possible for it to bacterial load in the chicken itself.
become contaminated with Salmonella and Campylobacter While there is potential to reduce the Campylobacter and
bacteria. While there has been a huge effort to try and sanitise Salmonella load with specic antibiotics, chickens need to be
the processing of chicken meat to eliminate bacterial contam- free of antibiotics before processing to ensure there is no trace
ination, many scientic studies have shown that they still persist of such compounds in the chicken meat. In addition, the increase
in low numbers. in antibiotic-resistant bacteria is causing concerns globally, and
Given the relatively high incidence of food poisoning in this has resulted in the reduction or, in some cases, ban of anti-
Australia its curious to note that most bacterial contamina- biotic use in livestock industries. New interventions aimed at
tion of poultry can be eradicated by appropriate cooking and reducing the contamination of poultry meat are required to
handling. Health departments at both state and national levels signicantly reduce the incidence of illness in humans.
alongside poultry industry representatives have developed exten- One such new intervention could involve nanotechnology,
sive education programs and fact sheets to encourage proper which applies to things 100 nm or less in size. Specically
cooking of animal products, yet the problem still persists. For designed nanoparticles could be used to bind to food-poisoning
instance, in late 2015 a 5-star hotel in Melbourne was at the bacteria in such a way as to inhibit or even prevent the growth
centre of a food poisoning outbreak and in early 2016 a caf on of the bacteria. These nanoparticles would be in the form of
Victorias Great Ocean Road had a similar outbreak. single-stranded DNA or RNA molecules that are able to bind
Coupled with the obvious distress that this causes their to specic targets, including proteins and peptides, with high
patrons, restaurants and the like can face expensive and lengthy anity and specicity. Nanoparticles have already been used to
Get f
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you s ac
ubscr cess plus
ibe a a
t aus dditional
obe
tscien c
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Oakozh
34 | | JULY/AUGUST 2017
regulate cellular processes and to guide
drugs to their specic cellular targets.
Nanotechnology has already been used
to detect many different bacterial
pathogens, including Campylobacter and
Salmonella. While these studies demon-
JULY/AUGUST 2017 | | 35
How Early Can We Predict
and Prevent Psychosis?
SCOTT R. CLARK, K. OLIVER SCHUBERT & BERNHARD T. BAUNE
The addition of a simple blood test could improve predictions of a rst psychotic episode.
sychosis is a loss of contact with reality that mani- are overweight or obese, nearly half have raised cholesterol or
36 | | JULY/AUGUST 2017
vchalup/Adobe
could be grouped into historical factors, symptoms and func- current medical practice, where assessment of psychosis is based
tion at the start of the study, and biological markers including on patient interview alone, and brain scans and blood tests are
brain wave patterns, protein markers of oxidation and fatty only used to exclude signicant physical illness that can cause
acid levels. Evidence suggests that high levels of oxidation may psychotic symptoms.
be responsible for damage to nerve cells, while fatty acids are We have used simple Bayesian mathematical techniques to
required for normal neuronal function, are at low levels in calculate the probability of a rst psychotic episode in a step-
active cases of psychotic illness, and are protective against wise fashion as new information becomes available. Our step-
psychotic illness. wise approach is similar to the decision-making process in
We found that the most accurate model included a history of psychiatry, and therefore these models should be easier to imple-
drug use, high levels of psychotic symptoms and poor function, ment into clinical practice.
and low blood levels of total fatty acid and nervonic acid levels While our results come from a small sample of patients, our
at baseline. Interestingly, nervonic acid is a component of the ndings suggest that standardised bedside assessment of history,
fatty myelin sheath that surrounds nerve cells and is required for symptoms and function, combined with a simple blood test
normal nerve function. Fatty acid supplementation (e.g. in sh for fatty acid levels, could greatly improve predictions of a rst
oil) is thought to be protective against psychotic symptoms. psychotic episode. This could allow earlier use of effective treat-
Our model identied 73% of high-risk patients that went on ments that may delay or even prevent the onset of psychosis
to suffer a psychotic episode. In comparison, standard assess- and signicantly reduce the individual and social burden of
ments only identied 28% of patients who later experienced psychotic illness.
psychosis. Our results suggest that such a model could help to Further testing of this model is required to conrm that our
identify those at highest risk of psychosis, allowing more assertive results can be replicated in larger samples. Such studies could
early treatment. take 510 years to produce denitive results.
One of the major goals of our research is to improve the
Dr Scott R. Clark is a consultant psychiatrist in a community clinic, and a clinical academic
prediction of mental health outcomes by combining new for The University of Adelaide, where he is co-convener of psychiatry courses in the Medicine
program. Dr K. Oliver Schubert is a consultant psychiatrist in an acute inpatient service, and
biomarkers with standard measures obtained during the patient a clinical senior lecturer for The University of Adelaide. Prof Bernhardt T. Baune is Chair of
Psychiatry and leads the Adelaide Integrated Mental Health Biobank and Biomarker Centre
interview. This approach represents a signicant advance on at The University of Adelaide.
JULY/AUGUST 2017 | | 37
Anterovium/Adobe
A Quantum of Silence
LUKE HELT & MICHAEL STEEL
Single photons have weird yet useful behaviours, with applications ranging from secure
communications to quantum computing. While current silicon photon sources often produce
additional noise photons that interfere with these emerging technologies, new research
has discovered a method to quieten this quantum chaos.
ot all light is the same. For example, a light parties knowing. This all or nothing constraint enables
38 | | JULY/AUGUST 2017
In particular, these noise photons will
lead to situations in which someone may
think they are sending a photon along a
communications channel when in fact they
are not. They may also cause someone to
Figure 1. The possible frequencies or colours involved in various photon pair- accidentally send more than one photon
generation processes, with down arrows indicating input laser light and up arrows
when it was believed that only one was
indicating the photons generated.
being sent. Issues related to having fewer
Non-linear optical media are used in telecommunications to or greater numbers of photons than anticipated can also impact
connect different parts of a bre optic network that are trans- quantum superposition, and thus quantum-enhanced database
mitting different colours of laser light. For example, a device searches.
made of third-order non-linear optical media can apply green
laser light to red laser light to convert it to blue laser light. Our Solution
Take away the red laser light, though, and the colour conver- We have managed to suppress these unwanted noise pairs of
sion process becomes something weird and quantum: there photons by introducing a Bragg grating into a given heralded
becomes a very small chance that the green laser light will create single photon source. One way to think about a Bragg grating
a pair of photons, one red and one blue, in the same device (Fig. is as a series of alternating layers of material. As light is trans-
1a). Similarly, there is also a very small chance that incident mitted or reected at each layer, it will interfere constructively
red laser light and blue laser light could be combined in the or destructively depending on its colour. Given the correct
same device to create a pair of green photons (Fig. 1b). The thicknesses and refractive indices, these layers can create a highly
key thing is that the combined energy of two incident photons reective mirror for a specic colour of light. Bragg gratings
is equal to the combined energy of the two photons created. can also be designed to reect more than one colour of light.
Although the aim is to create single photons, non-linear But what if one tries to create a pair of photons in a Bragg
quantum processes are rare and random. Therefore, the gener- grating made of a third-order non-linear optical material, with
ation of a pair of photons is quite useful. With a pair of photons, the grating designed to reect one of the colours of photons
one can detect one of them to learn about the existence of its that make up the pair? In a paper recently published in Phys-
partner. ical Review Letters (https://goo.gl/o4uwnN), we have demon-
Since the photon detected announces the presence of the strated that the presence of the Bragg grating can leave nowhere
other, this kind of device is known as a heralded single photon for a particular colour of photon to be created. And, because
source. Heralded single photon sources have been fabricated photons are created in pairs in these devices, this can mean that
from many second-order non-linear optical materials, including the pair creation is forbidden.
lithium niobate and barium borate. With careful engineering we can therefore design a Bragg
However, we believe that large-scale quantum optical tech- grating that can suppress the creation of noise photon pairs
nologies will only be made possible with the scalability and without compromising the creation of desirable photon pairs.
integration capabilities provided by third-order non-linear This is possible because, unlike with a colour lter, the suppres-
media, such as silicon or silicon nitride. Therefore, our most sion of a photon of one colour can occur with a Bragg grating
recent work has addressed an issue that is particular to heralded designed to reect a different colour than that of a noise photon;
single photon sources made of third-order non-linear mate- namely, the colour of its photon-pair partner.
rials that attempt to produce photon pairs of the same colour. We view this result, along with the calculation tools we
developed, as a new tool for heralded single photon source engi-
Its Not Quite That Easy neering, allowing for undesirable processes to be suppressed.
The problem is that, again using the example of red and blue Along the way, our work revealed that if photons cannot be
lasers to create a pair of green photons (Fig. 1b), the red laser produced in pairs in a third-order non-linear material, then
will also create one green photon and one deep red photon, they will not be produced at all.
while the blue laser will create one green photon and one purple We expect these ideas will be implemented in quantum
photon (Fig. 1c). That is, there are pairs of noise photons that optics laboratories in the near future, helping to bring inte-
will make it dicult to know which green photons herald the grated chip-scale sources of single photons closer to the real
presence of each other and which will herald the presence of a world.
red or blue photon. Any such confusion will reduce the effec- Dr Luke Helt is a postdoctoral research fellow working with Prof Michael Steel at the
Macquarie University node of the ARC Centre of Excellence for Ultrahigh Bandwidth Devices
tiveness of the applications mentioned above. for Optical Systems.
JULY/AUGUST 2017 | | 39
CONSCIENCE
40 | | JULY/AUGUST 2017
NEUROPSY
Scott Griessel/Adobe
Tim Hannan
JULY/AUGUST 2017 | | 41
DIRECTIONS Australian Academy of Technology and Engineering
We have three goals for our energy supply, two of which are The major issue is that there will be a probable 20-year period
uncontroversial: deliver electricity at the lowest cost to consumers during which we will need to replace our existing generating
and businesses, and ensure that the supply is reliable and capacity with these new solutions. The longer we delay the start
adequate. The third consideration to reduce (indeed remove) of this replacement cycle, the greater will be the unnecessary
greenhouse emissions from our electricity generators turns pumping of CO2 into the atmosphere. The real question is
the rational discussion on energy into an emotional debate. whether we wish to accelerate the replacement cycle of our
Clean energy (generally from sun or wind) is currently existing capacity.
more expensive than dirty energy from burning oil, coal or gas, The recent Independent Review of the Future Security of the
all of which release CO2 into the atmosphere. National Electricity Market, chaired by Chief Scientist Dr Alan
There are people who dont accept the need for clean energy Finkel, has grasped this challenge by proposing a Clean Energy
generation because they believe, contrary to all the scientic Target (CET) to drive investment in clean energy generation
evidence, that anthropogenic climate change is a myth or exag- technologies. Australia has been sorely lacking stable, long-term
geration. They are the clear minority. and bipartisan policy on energy for too long, and the Finkel
If you accept the necessity to achieve all three goals, it leaves Review provides us with a roadmap to achieving this. It is impor-
society with two choices: tant that all Australian governments commit to implementing
require all generating sources, including fossil fuels, to emit its recommendations.
zero (or almost zero) CO2. Renewables, biomass and nuclear Either a CET or a price on carbon emissions will speed up
do this naturally, but the fossil fuel generators would need the deployment of clean energy in Australia, but the question
to remove their emissions using technologies such as carbon is greatly complicated by the vested interests who drive our
capture and sequestration (CCS). current high-emission generation capacity, both the miners
put a price on carbon emissions and other pollutants (e.g. and the generators. The latter have made historical investments,
sulphur, mercury) so that the true cost of the generation and simply mothballing their plants will leave large stranded
cycle, including waste disposal, is taken into account. investments. The investors would much rather just let the
If we adopted one of these two options, the market should current capacity diffuse out through natural economic forces,
have the freedom to decide which generating technology to which will take a couple of decades or more.
implement based on its business case. We are at a crossroads with regard to our decisions on energy.
We would need to require suppliers of variable renewable We can continue to burn fossil fuels for another couple of
electricity to ensure reliable supply through the use of energy decades and let the natural replacement cycle take its course. Or
storage. The massive investments going into batteries, super- we can eliminate todays practices as soon as possible a solu-
capacitors and other storage solutions (such as pumped hydro) tion that will be supported by technology developments but
give us condence that we will be able to meet this storage need leave us with an investment hump in the short to medium
at utility to household scales. term.
There is also a need for smart grid technologies, but there People will argue that Australias decisions will not affect
are no major technological impediments to implementing them. the overall global impact on the greenhouse emissions by much,
On the current technology trajectory, the cost of reliable but that evades the real problem as to whether Australia aspires
renewables will be cheaper than fossil fuel generation prob- to be a global thought leader in the digitally disrupted 21st
ably within a decade but, while the price of electricity will go century, or just lazy and selsh.
up in the short to medium term, we will end up with secure, clean Professor Hugh Bradlow FTSE is President of the Australian Academy of Technology and
Engineering, and Dr Bruce Godfrey FTSE is an ATSE Director and Chair of ATSEs Energy
energy that is cheaper than dirty alternatives. Forum.
42 | | JULY/AUGUST 2017
EXPERT OPINION AusSMC
Finkel offers a chance to start breaking down the political intensity scheme, and reiterates why removing a price on carbon
deadlock over energy and climate policy. The report rightly has failed to increase the security of our electricity grid.
points out the need for policy and markets to be adapted to While it seems that all technology options have re-emerged
the realities of new technologies, and the need to integrate from previous white papers, the Finkel review has raised the
emissions reductions policy with energy policy. Importantly, white ag to gas, nuclear and carbon capture and storage options.
Finkel emphasises the cost that continued policy uncertainty Since the commencement of LNG exports on the east coast,
would have, and shows scenarios where electricity prices are gas prices domestically have had an enormous effect on elec-
lower under a stable low-emissions policy framework than tricity affordability. While the pursuit of unconventional gas
under continued uncertainty. Policy-makers should take heart resources may improve supply concerns, the continuation of
to embrace reform to markets and policy, and to do so with a high gas prices will be unabated. The reliance on gas as a tran-
long-term trajectory in mind. sition technology towards a low carbon economy should only
The clean energy target recommendation seems calibrated be a short-term option (http://tinyurl.com/y9hjgwgz).
to political realities, as an emissions trading scheme is politi-
cally out of the question for the current government and an
emissions intensity scheme was also rejected by government.
The use of nuclear power
How effective a clean energy target would be depends on the generation in Australia, while
ambition that government lls it with, its design and imple- unpopular, is seen by many energy
mentation, and on whether industry will have condence to
economics experts as the panic
invest on the basis of it. That, in turn, requires political stability
around energy policy. button option.
However, the low-carbon ambition that Finkel suggests risks
falling short of Australias task and opportunities in reducing The inclusion of nuclear as a viable option for Australia has
carbon emissions. Finkel calls for a minimum 28% reduction been discussed at length and rejected by energy economics
in carbon emissions from electricity by 2030, proportional to experts continually. The use of nuclear power generation in
the national Paris target. Twenty eight per cent would not be Australia, while unpopular, is seen by many energy economics
enough because the electricity sector can and needs to deliver experts as the panic button option. Its cost of deployment,
much greater percentage reductions than the economy overall. operation and overall life-cycle have yet to present a viable
There are large opportunities to cut carbon before 2030 by option for Australia. Furthermore, the lack of human capital
replacing ageing, inecient coal plants with renewables. The in Australia capable of operating utility-scale nuclear power
opportunities for renewables are plentiful in Australia and costs generation would require more than 10 years to establish.
are coming down rapidly, including for storage to manage inter- Australia needs a range of technologies and policy options
mittency. to address energy security coupled with the challenges of climate
The worry is that governments will take Finkels 28% reduc- change. The timeline for improving supply certainty must be
tion for the electricity sector as its target and thereby fail to dealt with now to avoid grid-wide blackouts. Additionally, in
achieve the economy-wide reduction by 2030, because less will order for Australia to transform to a lower carbon-intensive
be done in other parts of the economy. This would set Australia economy, renewable energy needs to be front-and-centre of
on a long-term emissions trajectory that is higher than it needs any plan to design the future electricity grid.
to be and out of line with the larger objectives. The Finkel Review has failed to excise itself from the previ-
A/Prof Frank Jotzo is Director of the Centre for Climate Economics and Policy at the ously identied pitfalls of non-renewable energy technology
Australian National Universitys Crawford School of Public Policy.
highlighted over the past 10 years. While Australia tolerates
The Finkel Review into securing the future of our electricity another pseudo-white paper on energy, what in effect will
system has chosen to hedge its bets on the design and imple- change? The answer is, most likely, nothing.
mentation of a transition strategy to a low carbon economy. Dr Liam Wagner is a Lecturer in Economics specialising in energy economics and policy at
A clean energy target is a simplied approach to an emissions Griffith University.
JULY/AUGUST 2017 | | 43
THE BITTER PILL Friends of Science in Medicine
44 | | JULY/AUGUST 2017
jaros
zpile
ws ki/Ad
obe
THE NAKED SKEPTIC Peter Bowditch
Hold the Front Page! nalist, both mentioned only one driver in the eld, and one of
them was about how the journalist had spent one minute and
The loss of specialist reporters in the clickbait
45 seconds as a passenger in a rally car (his total experience of
era of journalism matters more for science
the sport) and the emphasis was on how terrifying and life-
than other rounds.
threatening the experience had been. (The accompanying video
Once upon a time the mainstream media employed journal- on the website indicated that the car was travelling at about
ists with expertise in their round. Newspapers would have one half the speed it would be in competition.)
or two editions per day, with strict deadlines dictated by when In truth, neither of these really matter. Despite the occa-
the presses had to start rolling. Television had two main bulletins sional obsessive brand loyalty, it doesnt matter whether you
per day and radio stations had hourly news broadcasts. The carry an iPhone or a Samsung device or if the computer in front
electronic media would break into programs when signicant of you is a Mac or runs Windows or Linux. Most cars in a price
news stories broke, such as political crises or natural disasters, or style category do the job as well as any other. Sport is always
and newspapers would bring out the occasional special edition irrelevant and has little effect on the course of human affairs,
in the same situations, although printing and distribution logis- despite what the fans think.
tics meant that it had to be a really big story.
Two things have changed since Ben Hecht and Charles
MacArthur Broadway comedy The Front Page. Nobody seems The difference with science or health
to employ specialist (or even a sucient number of) journalists reporting is that there can be severe
anymore, and the news cycle has changed so that the deadline ramications if this is done wrongly
is always right now because the website has to be updated as
soon as anything happens.
or from a position of ignorance.
Apart from general news about world events, I have three
areas of interest that rarely if ever have earth-shattering breaking This is a science magazine, so youre asking When is he
news: information technology, motor sport, and health and going to start talking about science?. The difference with
science. These areas arent, or shouldnt be, affected by the science or health reporting is that there can be severe rami-
incessant and constant need to attract eyeballs to web pages, cations if this is done wrongly or from a position of ignorance.
and should allow journalists to put some time and thought Not only is there danger of people receiving wrong or easily
into what they write. misinterpreted health news, but its easy to give the impression
A few years ago, people working in IT would eagerly await that science consists of people doing random research and
the Tuesday editions of the big papers for the several pages of throwing the results out without thinking.
well written information about the development of computers Two recent examples of this had fear-inspiring headlines
and other technology and how these technologies were being with a bit of truth buried so far down that readers might have
applied. Today the knowledgeable journalists have gone (to given up before they got there. One started with: Taking
retirement or low circulation specialist publications) and the common anti-inammatories such as ibuprofen for only a week
mainstream media seems to just feature media releases slightly can signicantly raise the risk of having a heart attack. It
rewritten by people who think that computer technology started nished many hundreds of words later with: The increased
with the iPhone. heart attack risk may actually be caused by the complaint
General writing about cars and motoring is still done by prompting a person to take painkillers. The second article
competent journalists, many of whom seem to be the sons of reported a study apparently linking the consumption of aspar-
journalists I knew back when I was heavily involved with the tame to dementia. The study actually mentioned that it could
sport (one current motoring journalist is the nephew of my be that diabetes increases the risk of dementia and the consump-
rst rally navigator), but the reporting on the sporting side is tion of articial sweeteners just happens to be one of the things
generally abysmal. Except for the exploits of Australian Dan that people with diabetes do.
Ricciardo in Formula One (where the content is largely FIA Unfortunately the only time that journalism itself seems to
media releases), prominent coverage requires a crash, pictures get a mention in the mainstream media is when a major media
and signicant injury to competitors or spectators. outlet sacks a large number of journalists, so I cant see things
I recently did media coverage for an international rally and improving much.
I saw only two stories about the event in mainstream media. (I Luckily there are magazines like this one to get the real stories
write for a regional paper; I dont get into big dailies.) Both out there. Now to get more people to read them.
were written by someone describing himself as a sports jour- Peter Bowditch is a former President of Australian Skeptics Inc. (www.skeptics.com.au).
JULY/AUGUST 2017 | | 45
ECOLOGIC Rebecca Runting
46 | | JULY/AUGUST 2017
LOWE TECH Ian Lowe
JULY/AUGUST 2017 | | 47
OUT OF THIS WORLD David Reneke
48 | | JULY/AUGUST 2017
QUANDARY Michael Cook
The Facts About Surrogacy prematurely, on 26 July 2002. And from there Brookes life
started to go downhill.
The dismal death of Brooke Verity illustrates
She suffered from post-natal depression. Perhaps the men did,
the need for longitudinal studies of the long-
too. Dysarz broke up with Meehan, alleging abuse. Dysarz was
term outcomes of surrogacy.
denied visitation rights and Meehan was awarded custody of the
Whether you are pro-this or anti-that, a passionate believer in quadruplets. To escape Dysarz, Meehan moved back to Cali-
human dignity or an ultra-rational utilitarian, your bioethics fornia.
always has to begin with the facts. While knowledge of conse- As for the childrens mother, she just wanted to be Aunt
quences is only part of ethical decision-making, it is an essen- Brooke to them and felt miserable that she had been shut out
tial part. of their lives. She began keeping a diary for them in which the
Surrogacy is one issue in which the public gets only a very opening paragraph was: I love you all. Ill never regret what I
partial vision of the consequences. Normally the media focuses did. Every single day, Ill think about you.
on the joy of the commissioning parents, while the surrogate
mother remains anonymous and her story untold. But her life Normally the media focuses on the
after surrogacy is part of the consequences as well.
Nowhere was this more marked than in India, where some
joy of the commissioning parents,
clinics had dormitories for surrogate mothers in varying stages while the surrogate mother remains
of pregnancy. The clinics assured Western journalists that they anonymous and her story untold.
were happy and detached. And since there was an almost impen-
etrable language barrier between the journalists and the women, Brooke had another surrogate child for Dysarz afterwards.
it was practically impossible to check these bland reassurances. Then he became ill and moved interstate, abandoning the child.
Now India has closed the door to international surrogacy, so the She was awarded full custody. In 2007 she married Scott
stories have ceased. Cochran, a maths teacher at a community college, who spent
But around the world surrogacy is increasing, not decreasing, brief spells in jail for sexual misdemeanours in 2014 and 2016.
as older women and gay couples try to have children. Because Unsurprisingly, their marriage was strained and Brooke was
it is legal in the United States, many parents are drawn there. still grieving over the quadruplets. Perhaps this explains why the
However, the recent death of a surrogate mother in the state mother of eight became another victim of Americas opioid
of Kentucky unveiled hazards that exist even in the worlds epidemic.
richest nation. Even after her death, the dominos are still falling. Dysarz
For a brief moment in 2002, 23-year-old Brooke Verity was and Cochran are locked in a custody battle over the son Brooke
probably the worlds most famous surrogate mother. She had bore for him.
just given birth to quadruplets for a gay couple. These are the kind of dismal consequences that are seldom
The four children, who now live in California, turn 15 in July. reported in the media. Even more disturbing, they are seldom
But Brooke wont be celebrating with them. She died suddenly studied by academics. How many women suffer like Brooke
in November of chronic drug abuse at the ripe old age of 37. It Verity after surrogacy? It is easy to say that she was an excep-
is a sad story and it helps to explain why Harvard women prefer tional case, but the truth is that we dont know. How about
careers in investment banking to careers in surrogacy. some serious longitudinal studies of the lives of surrogate
When Brooke was 4, her parents divorced. After a year with mothers?
her mother, she moved in with her father. She became preg- Michael Cook is editor of BioEdge, an onine bioethics newsletter.
nant at 17, had a son, married the father, had twins, and then
divorced.
A couple of years later her hairdresser, Thomas Dysarz, and
his partner, Michael Meehan, asked her if she would be inter-
ested in becoming a surrogate mother. She signed a contract
SUBS
to bear a child for each of them. She surrendered her parental
rights as the biological mother and agreed to foetal reduction, @ aus C R
tscien IBE
e
Adob
JULY/AUGUST 2017 | | 49
AUSTRALASIAN SKY
July 2017
URSA MAJOR
North
STAR BRIGHTNESS
Zero or brighter
st
1 magnitude
2nd NE Vega CANES VENATICI
3rd
NW
LYRA
4th BOOTES
CORONA BOREALIS
LEO MINOR
COMA BERENICES
Arcturus Arcturus
VIRGO
Altair
OPHIUCHUS P Jupiter
Zubenelgenubi Spica
LIBRA Zubenelgenubi
CORVUS
SEXTANS
SERPENS CRATER
AQUILA SCUTUM
Saturn
East
P Antares Antares
West
Centre of the Galaxy
SCORPIUS HYDRA
SCORPIUS
LUPUS
SAGITTARIUS CENTAURUS
NORMA CENTAURUS
Omega Centauri
TEA POT NORMA
Alpha Centauri
CORONA AUSTRALIS ANTLIA
POINTERSHadar CRUX SOUTHERN CROSS
ARA CIRCINUS
Alpha Centauri
Mimosa
CRUX
CAPRICORNUS TRIANGULUM
TRIANGULUM AUSTRALE PYXIS
TELESCOPIUM AUSTRALE VELA
MUSCA
Proxima Centauri
MICROSCOPIUM APUS
PAVO APUS
CHAMAELEON
CARINA
INDUS
OCTANS South Celestial Pole
OCTANS
VOLANS PUPPIS
PISCIS AUSTRINUS
MENSA Adhara CANIS MAJOR
50 | | JULY/AUGUST 2017
AUSTRALASIAN SKY
August 2017
North
STAR BRIGHTNESS
Zero or brighter Deneb
st
1 magnitude
CYGNUS
2nd NE CANES VENATICI
3rd Vega
NW
LYRA
4th
CORONA BOREALIS
HERCULES BOOTES
VULPECULA
DELPHINUS SERPENS
Altair
Barnards star
EQUULEUS OPHIUCHUS
AQUILA First quarter
Moon on 29th Jupiter
SCUTUM VIRGO
SERPENS
Saturn LIBRA
Zubenelgenubi
P
Spica
P
Teapot Antares
East
West
M6
M7
CAPRICORNUS SCORPIUS
NGC 6231 CRATER
LUPUS
AQUARIUS CORONA AUSTRALIS
OCTANS
South Celestial Pole
47 Tucanae CHAMAELEON VELA
TUCANA
SMC
Sydney Observatory is part of the Museum of Applied Arts and Sciences. The Sydney Observatory night sky map was created by Dr M. Anderson using the TheSky
software. This months edition was prepared by Jane Kaczmarek. 2017 Museum of Applied Arts and Sciences, Sydney.
JULY/AUGUST 2017 | | 51
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