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Article history: Preeclampsia presents serious risk of both maternal and fetal morbidity and mortality. Biomarkers for the
Received 4 February 2017 detection of preeclampsia are critical for risk assessment and targeted intervention. The goal of this study
Accepted 6 February 2017 is to screen potential biomarkers for the diagnosis of preeclampsia and to illuminate the pathogenesis of
Available online 7 February 2017
preeclampsia development based on the differential expression network. Two groups of subjects,
including healthy pregnant women, subjects with preeclampsia, were recruited for this study. The
Keywords:
metabolic proles of all of the subjects' serum were obtained by liquid chromatography quadruple time-
Biomarker
of-ight mass spectrometry. Correlation between metabolites was analyzed by bioinformatics technique.
Metabolomics
Preeclampsia
Results showed that the PC(14:0/00), proline betaine and proline were potential sensitive and specic
biomarkers for preeclampsia diagnosis and prognosis. Perturbation of corresponding biological path-
ways, such as iNOS signaling, nitric oxide signaling in the cardiovascular system, mitochondrial
dysfunction were responsible for the pathogenesis of preeclampsia. This study indicated that the
metabolic proling had a good clinical signicance in the diagnosis of preeclampsia as well as in the
study of its pathogenesis.
2017 Elsevier Inc. All rights reserved.
http://dx.doi.org/10.1016/j.bbrc.2017.02.032
0006-291X/ 2017 Elsevier Inc. All rights reserved.
120 T. Chen et al. / Biochemical and Biophysical Research Communications 485 (2017) 119e125
nuclear magnetic resonance (1HNMR) spectroscopy or Mass acetonitrile for 0e1.5 min; 2e100% acetonitrile for 1.5e13 min;
Spectrometry (MS), metabolomics offers fresh insight into disease washed with 100% acetonitrile for 13e16 min; re-equilibration step
[16,17]. Recent interest has mounted in the metabolomics approach for 5 min. The sample injection volume was 5 mL.
to predict and characterize preeclampsia [18e23]. So far, no single Mass detection was operated in both positive and negative ion
biomarker has been deemed suitable for clinical application at modes with the following setting: drying gas (N2) ow rate, 8 L/
present, and it is not yet clear how molecules are mutual inuence min; gas temperature, 330 C; pressure of nebulizer gas, 35 psig;
in the process of PE [24]. Vcap, 4000 V; fragmentor, 160 V; skimmer, 65 V; scan range, m/z
In the present study, we applied a metabolomics-based liquid 80e1000. All analyses were acquired using the instrument mass
chromatography quadruple time-of-ight mass spectrometry (LC- spray to ensure accuracy and reproducibility. Leucine enkephalin
Q-TOF-MS) technique to characterize the metabolic proles of was used as the instrument reference mass (m/z 556.2771 in ES
preeclampsia, subsequently employed bimolecular network tech- and 554.2615 in ES) at a concentration of 100 ng/ml for all ana-
nology to identify corresponding pathogenesis. We aimed to deci- lyses. The MS/MS analysis was acquired in targeted MS/MS mode
pher the reliable and sensitive biomarkers for preeclampsia and with collision energy from 10 EV to 40 EV.
corresponding pathogenesis.
2.1. Study population Serum samples run was randomization and the pooled quality
control (QC) sample was analyzed every 6 serum samples. If dif-
Women with pregnancies complicated by preeclampsia were ferences were detected between QC control results (either previous
included as cases. Healthy pregnant women with no previous his- results or within the analysis), the analysis was stopped, the ioni-
tory of pregnancies with preeclampsia or FGR were included as zation source and the column were cleaned, and the mass spec-
controls. Preeclampsia was dened as persistent hypertension trometer recalibrated. Additional samples were not analyzed until
(systolic/diastolic blood pressure 140/90 mmHg) plus proteinuria the QC analyses were satisfactory.
(0.3 g/24 h or 1 by dipstick) developing after 20 weeks of
gestation [25]. The participants were interviewed about their
health and pregnancy. All participants were weighed, and BMI was 2.6. Data processing and statistical analysis
calculated in kg/m2. The characteristics of study participants was
shown in Table 1. The women were asked to fast for 1 h before their The LCeMS raw data were exported by Agilent Mass Hunter
visit to avoid immediate effects of meals on the metabolic proles. Qualitative Analysis Software (Agilent Technologies, Palo Alto, CA,
All women gave written informed consent at study entry. The study USA). The lter parameters were used as follows: restrict retention
was approved by the Regional Committee for Medical Research time, 0e21 min; restrict m/z, 80e1000 amu; peak relative height,
Ethics in Tongren Hospital, School of Medicine, Shanghai Jiaotong 1.5%; Mass tolerance, 0.05 Da; Retention time windows, 0.05 min;
University. A peak table was then created including the information of the
retention time, m/z and ion intensity of all ions. The data of each
2.2. Chemicals and reagents sample were normalized to the total area to correct for the MS
response shift between injections due to any possible intra- and
LC-MS grade acetonitrile and methanol were purchased from inter-day variations. Then the data was exported into SIMCA-P13.0
Honeywell Burdick and Jackson (Muskegon, MI, USA). Mass Spec- software (Umetrics AB, Umea, Sweden) for multivariate analysis,
troscopic grade formic acid was purchased from Fluka (Buchs, that is, PCA, PLS-DA and OPLS-DA. Principle component analysis
Switzerland). Ultra-pure water was obtained in a Milli-Q system (PCA) and orthogonal partial least squares-discriminant analysis
from Millipore (Bedford, MA, USA). Reference standards were (OPLS-DA) were carried out to discriminate the metabolic patterns
purchased from Sigma-Aldrich (St. Louis, MO, USA). between PE and healthy controls after mean centering and unit
variance scaling. To guard against model over-tting, the default 7-
2.3. Serum sample collection fold cross-validation was applied. Those variables with VIP >1.0
were selected as relevant for group discrimination [26]. Then the
Venous blood was drawn into non-heparinized tubes, left to clot Student's t-test was applied to all metabolites. A classical one stage
for 30 min at room temperature, and centrifuged at 3500 rpm for method of false discovery rate (FDR) was performed to adjust the p-
10 min. A serum sample (0.6 mL) was separated and stored value [27]. Differentiating metabolites with VIP >1 and p < 0.05
at 80 C, thawed once and 100 mL of the serum was added to (adjusted p-value) were selected as potential biomarkers. Those
300 mL methanol (with Internal standard 2-chlorophenylalanine, markers were identied with the aid of available reference stan-
20 mg/ml), and then the mixture was shaken vigorously for 30 s. dards in our lab and the web-based resources such as the Human
After centrifugation at 12 000 rpm for 10 min at 4 C, 200 mL of Metabolome Database (http://www.hmdb.ca/), Metlin(https://
supernatant and the mixture was stored at 80 C until analysis. metlin.scripps.edu/). The MS/MS analysis was acquired in tar-
geted MS/MS mode with collision energy 10, 20, 40 eV to identify
2.4. LC-Q-TOF/MS potential biomarkers. Diagnostic model was constructed with the
markers, using linear discrimination analysis method with the
Serum metabolite proling was performed on an Agilent 1290 MetaboAnalyst 3.0 (http://www.metaboanalyst.ca/), a compre-
Innity Liquid Chromatography System quipped with an Agilent hensive, Web-based tool designed for processing, analyzing, and
6538 Accurate-Mass QTOF/MS (Agilent Technologies, Santa Clara, interpreting metabolomic data. The classication performance
CA, USA). Separation of all samples was performed on an Eclipse (specicity and sensitivity) was assessed by AUC value of the
plus C18 column (1.8 mm, 3.6 mm 100 mm, Agilent) with a col- receiver operating characteristic (ROC) curves. The corresponding
umn temperature set of 45 C. The ow rate was 0.25 mL/min and up- and down-regulated trend metabolites varied between PE and
the mobile phase consisted of ultrapure water with 0.1% formic acid healthy controls were used for subsequent metabolic pathway
and acetonitrile. The following gradient program was used: 2% analysis.
T. Chen et al. / Biochemical and Biophysical Research Communications 485 (2017) 119e125 121
2.7. IPA analysis nucleic acid metabolism, carbohydrate metabolism and cardiovas-
cular system development. These metabolites were correlated with
Molecular networks for the candidate metabolites were built nine canonical pathways, such as glycine degradation (creatine
and analysis of canonical pathways and bio-functions were con- biosynthesis), iNOS signaling, nNOS Signaling in skeletal muscle
ducted by using the Ingenuity Pathway Analysis system (IPA, In- cells, mitochondrial dysfunction, nitric oxide signaling in the car-
genuity Systems, http://www.ingenuity.com), to gain insight into diovascular system, citrulline-nitric oxide cycle, as well as eNOS
the typical metabolic alterations associated with the biomarkers signaling.
and the mechanisms relevant to PE.
4. Discussion
3. Results
Preeclampsia (PE) is a severe pregnancy complication, which is a
3.1. Identication of the differential metabolites leading cause of 50,000e60,000 maternal deaths annually. Until
now the diagnosis of PE has been the focus on blood pressure and
Typical total ion current (TIC) chromatograms of serum samples urinary protein levels with low predictive ability. Therefore, it is
were obtained from both healthy and Preeclampsia. PCA scores plot need to identify novel biomarkers to improve diagnosis and deepen
revealed a trend of separation between 20 PE patients and 20 the understanding of the pathogenesis of PE. In order to establish
controls (Fig. 1A). An OPLS-DA model was obtained with one pre- highly efcient and specic biomarkers for screening of PE patients,
dictive component and two orthogonal components. The scores in this study we applied LC-MS based metabolomics to screen the
plot demonstrated a separation between PE patients and 20 con- metabolites with high predict efciency of PE from maternal serum.
trols (Fig. 2A). A 999-time permutation test was performed to Biomarker Analysis was assessed by AUC value of the receiver
validate the OPLS-DA model. The result showed that the intercept operating characteristic (ROC) curves with the MetaboAnalyst 3.0.
for the Q2 to the y-axis is below zero (Fig. 2B), which indicated The results suggested that Phosphatidylcholine- PC(14:0/00), Pro-
models is not over-tting. 49 metabolites were selected with VIP >1 line betaine and Proline were potential sensitive and specic bio-
and p < 0.05 (adjusted p-value) (Table 2). Those differentiating markers for preeclampsia diagnosis and prognosis. And then we
metabolites included 1 lysophosphatidylcholines (LysoPE (0:0/ rstly build and analyzed molecular networks for the candidate
16:0)), 8 glycerophosphocholines (2PC, 2PEs, 2PI, 2PS), and 1 metabolites to gain insight into the typical metabolic alterations
acylcarnitine. Among that 21 metabolites were up regulated in PE associated with the biomarkers and the mechanisms relevant to PE.
patients with fold change >2 and 4metbolites were down regulated According to our pathway analysis with IPA, glycine degradation
in PE patients with fold change <0.5. ROC curve analysis indicated (Creatine Biosynthesis), iNOS Signaling, nNOS Signaling in Skeletal
that PC(14:0/00), Proline betaine and Proline, with an area under Muscle Cells, Mitochondrial Dysfunction, Nitric Oxide Signaling in
the curve value of 0.935,0.9275,0.9225 respectively, were potential the Cardiovascular System, Citrulline-Nitric Oxide Cycle, as well as
sensitive and specic biomarkers for preeclampsia diagnosis and eNOS Signaling, were very interesting concerning the pathophysi-
prognosis (Fig. 3). ology of PE.
PC is a major component of biological membranes in higher
3.2. Metabolic pathway analysis with IPA eukaryotes, and it can be secreted by specialized tissues for
important extracellular tasks. In PE patients, PC and cholesterol
In order to further understand the correlation between the content of placental tissue have been observed higher than control
metabolites, bioinformatics analyses were performed using the IPA by enzymatic detection [28,29], and there were differences in lipid
software, leading to the identication of biological association mass spectral ion intensity between healthy and PE pregnancies
networks. As shown in Fig. 4, the network was built based on the [30,31]. In our study, PC(14:0/00) was higher in PE patients, which
differentiated metabolites between the PE and healthy control. The was consistent with previous studies. Other PCs were almost higher
established network functions in PE include lipid metabolism, in PE patients with fold change >2, which were synthesized with
Fig. 1. Principle component analysis (PCA) scores plot discriminating the metabolic proles in serum of PE and those in healthy controls dataset. A, POS(7 components model:
R2X 0.424, Q2 0.216). B, NEG (7 components model: R2X 0.427, Q2 0.198). (:) QC group; (-) Healthy Control group; (C) PE group.
122 T. Chen et al. / Biochemical and Biophysical Research Communications 485 (2017) 119e125
Fig. 2. Orthogonal partial least squares-discriminant analysis (OPLS-DA) scores plot and permutation test for the model discriminating serum samples from PE patients and healthy
controls. (A1) POS-OPLS-DA scores plot. The model parameters were: R2Xcum 0.264, R2Ycum 0.977, Q2 0.819. (A2) NEG-OPLS-DA scores plot. The model parameters were:
R2Xcum 0.384, R2Ycum 0.904, Q2 0.856. (B1) A 999-times permutation test for the corresponding model. The Y-axis intercepts were:R2 (0, 0.651), Q2 (0, 0.253). (B2) A 999-
times permutation test for the corresponding model. The Y-axis intercepts were:R2 (0, 0.622), Q2 (0, 0.257).
Table 2
Identied differential metabolites in the serum of healthy and PE group.
Fig. 3. ROC curve analysis of potential serum biomarker levels for differentiating the PE group from the control group.
predictor of the PE. According to our pathway analysis with IPA, Signaling in Skeletal Muscle Cells, Mitochondrial Dysfunction, Ni-
these potential makers found in our study were related to Glycine tric Oxide Signaling in the Cardiovascular System, Citrulline-Nitric
Degradation (Creatine Biosynthesis), iNOS Signaling, nNOS Oxide Cycle, as well as eNOS Signaling, as shown in Fig. 4, All the
124 T. Chen et al. / Biochemical and Biophysical Research Communications 485 (2017) 119e125
Fig. 4. Biological network, canonical pathways and functions related to the identied metabolites. In the network, molecules are represented as nodes, and the biological rela-
tionship between two nodes is represented as a line. Red symbols represent up-regulated metabolites; blue symbols represent down-regulated metabolites; while the green
symbols represent canonical pathways that are related to the identied specic metabolites. Solid lines between molecules show a direct physical relationship between molecules,
while dotted lines show indirect functional relationships. (For interpretation of the references to colour in this gure legend, the reader is referred to the web version of this article.)
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