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Department of Environmental Engineering, Yonsei University, Wonju, Gangwon-do 220-710, South Korea
Department of Environmental Biotechnology, Mubarak City for Scientific Research and Technology Applications, New Borg El Arab City,
Alexandria 21934, Egypt
c
KIST Gangneung Institute, Gangneung 210-340, South Korea
d
Bioenergy Center, Korea Institute of Energy Research, Daejeon 305-343, South Korea
b
article info
abstract
Article history:
Microalgal lipids are the oils of the future for sustainable biodiesel production. One of the
most important decisions in obtaining oil from microalgae is the choice of species. A total
of 45 algal cultures were isolated from a freshwater lake at Wonju, South Korea. Five
10 April 2011
microalgal isolates were selected based on their morphology and ease of cultivation
under our test conditions. These cultures were identified as strains of Scenedesmus obli-
quus YSL02, Chlamydomonas pitschmannii YSL03, Chlorella vulgaris YSL04, S. obliquus YSL05,
and Chlamydomonas mexicana YSL07 based on microscopic examination and LSU rDNA
Keywords:
Biodiesel
(1.84 0.30 g L1) with a lower lipid content (29% w/w), than did Chla. pitschmannii YSL03
Freshwater
(maximum biomass concentration of 1.04 0.09 with a 51% lipid content). Our results
Isolation
suggest that Chla. pitschmannii YSL03 is appropriate for producing biodiesel based on its
Microalgae
1.
Introduction
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2.
2.1.
Isolation, purification and identification of
microalgae
Water samples used to isolate microalgae were collected
aseptically from sites that appeared to contain algal growth in
2.2.
DNA extraction, PCR amplification, sequencing, and
phylogenetic analysis
An aliquot of cultured cells (1 mL) was harvested in the mid- to
late exponential growth phase (10e14 days) by centrifugation
(13,000 g for 3 min at 4 C) in a sterile microcentrifuge tube.
Genomic DNA was extracted using a Plant Genomic DNA
extraction kit (SolGent, Daejeon, S. Korea) according to the
manufacturers instructions and protocols. The DNA
concentration of the extracted DNA was measured at 260 nm
using a spectrophotometer (HACH, DR/4000v, USA). To
amplify the D1-D2 (LSU) coding region of the rDNA, amplification reactions were performed on a T-Gradient thermocycler (Biometra GmbH, Gottingen, Germany) using the
universal eukaryotic primers 50 -AGCGGAGGAAAAGAAACTA3 as forward and 50 -TACTAGAAGGTTCGATTAGTC-3 as
reverse, according to the PCR protocol described by Sonnenberg et al. [13]. Aliquots (10 mL) of the reaction mixtures were
analyzed by 1% horizontal agarose gel electrophoresis to
confirm the presence of product. The PCR products were
purified using the Gel PCR Clean-Up System (Applied Biosystems, Foster, CA). Sequencing reactions were performed
using a Dye Deoxy Terminator Cycle Sequencing Ready
Reaction Kit (Applied Biosystems, Foster City, CA), and
sequencing fragments were analyzed on a ABI Prism 377 DNA
Sequencer.
Ribosomal RNA gene sequences from the isolates were
searched against GenBank using BLAST [14]. Aligned
sequences were checked manually and were edited with
Genedoc [15]. Sequences containing fewer than 200 nucleotides or in excess of 1000 nucleotides were removed, and
sequences not belonging to green microalgal species were also
discarded from our study. A phylogenetic tree was constructed using the neighbor-joining (NJ) algorithm using
Kimuras two-parameter model of sequence evolution, as
implemented in the MEGA4 program package [16].
b i o m a s s a n d b i o e n e r g y 3 5 ( 2 0 1 1 ) 3 0 7 9 e3 0 8 5
2.3.
2.4.
2.5.
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3.
3.1.
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3.2.
3.3.
Table 1 e The accession numbers, lengths in base pairs, similarities between amplified sequences, and the closest relative
sequences for five strains of environmentally isolated microalgae.
Microalgal strain
S. obliquus YSL02
Chla. pitschmannii YSL03
C. vulgarisYSL04
S. obliquus YSL05
Chla. mexicana YSL07
Accession number
Length (nt)
GU732415
GU732416
GU732417
GU732418
GU732420
864
874
881
864
868
% Similarity
97
99
97
97
99
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3.4.
S. obliquus YSL02
Chla. pitschmannii
YSL03
C. vulgaris YSL04
S. obliquus YSL05
Chla. mexicana
YSL07
Microalgal
strain
Lipid
Lipid content
Biomass
productivity productivity (% biomass)
(g L1)
(g dwt L1)
1.84 0.30
1.04 0.09
0.53 0.04
0.54 0.13
29
51
1.65 0.07
1.71 0.53
1.53 0.30
0.44 0.05
0.48 0.01
0.45 0.05
26
28
29
Lauric acid
(C12:0)
Myristic acid
(C14:0)
Palmitic acid
(C16:0)
Palmitoleic acid
(C16:1)
Heptadecanoic
acid (C17:0)
Stearic acid
(C18:0)
Oleic acid
(C18:1n9c)
a-Linolenic acid
(C18:3n3)
g-Linolenic acid
(C18:3n6)
Total
11
10
34
10
29
26
22
25
50
17
20
23
20
13
53
23
23
25
100
100
100
100
100
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4.
Conclusions
Acknowledgements
This work was supported by the Students Association of the
Graduate School of Yonsei University and was funded by the
Graduate School of Yonsei University, and Yonsei University
research fund of 2009, 21st Frontier research project
(Sustainable Water Resources Research Center 3-4-3), Global
Research Laboratory project (Korea Institute of Geosciences
and Mineral Resources NP2008-019) and the Brain Korea-21
(BK-21) program of the Ministry of Education, Korea.
references
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