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Haemophilus influenzae, formerly called Pfeiffer's bacillus, is a non-motile Gramnegative pleomorphic rod-shaped bacterium first described in 1892 by Richard
Pfeiffer during an influenza pandemic. It is facultatively anaerobic. H.
influenzae was mistakenly considered to be the cause of influenza until 1933, when
the viral etiology of the flu became apparent. Still, H. influenzae is responsible for
a wide range of clinical diseases.
Diseases
Most strains of H. influenzae are opportunistic pathogens - that is, they usually
live in their host without causing disease, but cause problems only when other
factors (such as a viral infection or reduced immune function) create an
opportunity. Naturally-acquired disease caused by H. influenzae seems to occur in
humans only. In infants and young children, H. influenzae type b (Hib) causes
bacteremia, pneumonia, and acute bacterial meningitis. Occasionally, it
causes cellulitis, osteomyelitis, epiglottitis, and infectious arthritis. Due to routine
use of the Hib conjugate vaccine in the U.S. since 1990, the incidence of invasive
Hib disease has decreased to 1.3/100,000 in children. However, Hib remains a
major cause of lower respiratory tract infections in infants and children in
Culture
Bacterial culture of H. influenzae is performed on Chocolate agar at 37C in an
enriched CO2 incubator. Blood agar growth is only achieved as a satellite
phenomenon around other bacteria. H. influenzae will grow in the hemolytic zone
of Staphylococcus aureuson blood agar plates. The hemolysis of cells by S.
aureus releases nutrients vital to the growth of H. influenzae. H. influenzae will not
grow outside the hemolytic zone of S. aureus due to the lack of nutrients in these
areas.
Colonies of H. influenzae appear as raised or convex, smooth, pale, grey
or transparent. Gram-stained and microscopic observation of a specimen of H.
influenzae will show Gram-negative coccobacilli with no specific arrangement.
Further serological is necessary to distinguish the capsular polysaccharide and
differentiate between H. influenzae b and non-encapsulated species. H.
influenzae is a finicky bacterium to culture, and any modification of culture
procedures can greatly reduce isolation rates. Poor quality of laboratories in
developing countries has resulted in poor isolation rates of H. influenzae.
IF SUSCEPTIBLE:
ampicillin
amoxicillin
ampicillin/sulbactam
amoxicillin/clavulanate
cefuroxime
ceftriaxone
cefotaxime
ALTERNATIVES:
Trimethoprim-Sulfomethoxazole(TMP-SMX)
azithromycin
clarithromycin
doxycycline
Staphylococcus aureus
Staphylococcus aureus on Columbia agar with 5% defibrinated sheep blood (BioRad). Individual colonies on agar are round,convex, and 1-4 mm in diameter with a
sharp border. On blood agar plates, colonies of Staphylococcus aureus are
frequently surrounded by zones of clear beta-hemolysis. The golden
appearance of colonies of some strains is the etymological root of the bacteria's
name; aureus meaning "golden" in Latin.
Methicillin-resistant strains of Staphylococcus aureus (i.e. MRSA) often have
only weak or no beta-hemolysis and special cultivation media with oxacillin, mannitol
and NaCl for their isolation are used. MRSA is able to grow on this media and
produce colonies of certain color, depending on used pH indicator (in this picture
pink).
Staphylococcus aureus may occur as a commensal on human skin; it also occurs in
the nose frequently (in about a third of the population) and throat less
commonly. The occurrence of S. aureus under these circumstances does not always
indicate infection and therefore does not always require treatment (indeed,
treatment may be ineffective and re-colonisation may occur). It can survive on
domesticated animals such as dogs, cats and horses. S. aureus can infect other
tissues when barriers have been breached (e.g., skin or mucosal lining). This leads
to furuncles (boils) and carbuncles (a collection of furuncles). In infants S.
aureusinfection can cause a severe disease Staphylococcal scalded skin syndrome
(SSSS). Deeply penetrating S. aureus infections can be severe. Prosthetic joints
put a person at particular risk for septic arthritis, and staphylococcal
endocarditis (infection of the heart valves) and pneumonia, which may be rapidly
spread.
IF SUSCEPTIBLE:
ampicillin/sulbactam
amoxicillin/clavulanate
oxacillin
nafcillin
cefazolin
ceftriaxone
Macrolides
Clindamycin
ALTERNATIVES:
Trimethoprim-Sulfomethoxazole(TMP-SMX)
vancomycin
MRSA
vancomycin
teicoplanin
linezolid
quinupristin/dalfopristin
TMP-SMX
rifampicin
Streptococcus pneumoniae
IF SUSCEPTIBLE:
penicillin
ampicillin
amoxicillin
cephalosporins I, II
macrolides
PENICILLIN RESISTANT:
cephalosporins III (e.g., cefotaxime, ceftriaxone)
ALTERNATIVES:
vancomycin
chloramphenicol
Streptococcus agalactiae
NONMOTILE
NON-SPORE-FORMING
CATALASE: NEGATIVE
OXIDASE: NEGATIVE
FACULTATIVELY ANAEROBIC
Identification of Streptococcus agalactiae
catalase test (negative)
CAMP test (positive)
PYR test ( negative unlike S.pyogenes )
Lancefield's group B antigen presence(latex agglutination)
Antibiotic treatment of Streptococcus pneumoniae infections
Should be always guided by in vitro susceptibility tests!!
Selection of appropriate antibiotics depends on diagnosis!!
IF SUSCEPTIBLE:
penicillin
ampicillin
amoxicillin
cephalosporins I, II, III
macrolides
clindamycin
ALTERNATIVES:
vancomycin
Bordetella pertussis
the ability to inhibit the function of the host's immune system. Two toxins, known
as the pertussis toxin (or PTx) andadenylate cyclase (CyaA), are responsible for
this inhibition. CyaA converts ATP to cyclic AMP, and PTx inhibits an intracellular
protein that regulates this process. The end result is that phagocytes convert too
much ATP to cyclic AMP, which can cause disturbances in cellular signaling
mechanisms, and prevent phagocytes from correctly responding to an infection.
The infection occurs most with children under the age of one when they are
unimmunized or children with faded immunity, normally around the age 11 through
18. The signs and symptoms are similar to a common cold: runny nose, sneezing, mild
cough, and low-grade fever. The patient becomes most contagious during the
catarrhal stage of infection, normally 2 weeks after the coughing begins. It may
become airborne when the person coughs, sneezes, or laughs. Pertussis vaccine is
part of the DTaP (diphtheria, tetanus, acellular pertussis) immunization. The
paroxysmal cough precedes a crowing inspiratory sound characteristic of pertussis.
After a spell, the patient might make a whooping sound when breathing in, or
vomit. Adults have milder symptoms, like prolonged coughing without the whoop.
Infants less than 6 months may not have the typical whoop. A coughing spell may
last a minute or more, producing cyanosis, apnoea and seizures. However, when not
in a coughing fit, the patient does not experience trouble breathing. This is
becauseBordetella pertussis inhibits the immune response and therefore very little
mucus is generated in the lungs. A prolonged cough may be irritating and sometimes
a disabling cough may go undiagnosed in adults for many months.
General Description
GRAM-NEGATIVE RODS
NONMOTILE
NONSPOREFORMING
CATALASE: POSITIVE
OXIDASE: POSITIVE
AEROBES
BASIC TESTS FOR IDENTIFICATION
Slow growth on selective media for pathogenic bordetellae
Urease production
Nitrate reduction
ANTIBIOTIC TREATMENT
MACROLODES
Azithromycin
Clarithromycin
Erythromycin
Alternative
Trimethoprim-sulfamethoxazole (Co-trimoxazole)
Salmonella spp.
Four different serotypes of Salmonella enterica ssp. enterica on Endo agar with
biochemical slope (see here). Glucose degradation is accompanied with formation of
acid compounds (red slope) and gas production (serotype Typhi without gas). All
strains are lactose negative and conspicuous is strongly positive reaction around
mannitol tablet and H 2S production with formation of black precipitate under glass
and in area of loop punctures. Serotype Typhi and Typhimurium isolated from
hemocultures. Highly mucoid strain of serotype Enteritidis isolated from a patient
with urinary infection.
Raw chicken and goose eggs can harbor S. enterica, initially in the egg whites,
although most eggs are not infected. As the egg ages at room temperature, the
yolk membrane begins to break down and S. enterica can spread into the yolk.
Refrigeration and freezing do not kill all the bacteria, but substantially slow or
halt their growth. Pasteurizing and food irradiation are used to kill Salmonella for
commercially-produced foodstuffs containing raw eggs such as ice cream. Foods
prepared in the home from raw eggs such as mayonnaise, cakes and cookies can
spread salmonella if not properly cooked before consumption.
General Description
GRAM-NEGATIVE RODS
MOTILE
NONSPOREFORMING
CATALASE: POSITIVE
OXIDASE: NEGATIVE
FACULTATIVELY ANAEROBIC
BASIC TESTS
FOR IDENTIFICATION
MacConkey growth
Indole production
Methyl red
Voges-Proskauer
Citrate(Simmons)
(depends on serotype!!
e.g., serotype Typhi = "-")
Hydrogen sulfide(TSI)
(depends on serotype!!)
Urea hydrolysis
Lysine decarboxylase
(serot. Paratyphi A
negative)
Arginine dihydrolase
Ornithine decarb.
(depends on serotype!!;
e.g., serotype Typhi = "-")
Motility (36 C)
(depends on serotype!!)
D-glucose/gas
(depends on serotype!!
e.g., serotype Typhi "+/-")
+/+
D-mannitol fermentation
Sucrose fermentation
Lactose fermentation
D-sorbitol fermentation
(depends on serotype!!)
Cellobiose
Esculin hydrolisis
Acetate utilization
ONPG test
Neisseria meningitidis
For cultivation of pathogenic Neisseria are used special media for cultivation and
isolation of nutritionally fastidious microorganisms. If this media contain intact
erythrocytes, Neisseria meningitidis grows on them without
hemolysis.
As Neisseria meningitidis is resistant to vancomycin and colistin, these antibiotics
are often added directly in the medium to inhibit other gram-positive and gramnegative bacteria. Meningococcus require an aerobic atmosphere for its growth.
Carbon dioxide enhances growth, but is not required. N.meningitidis is oxidase
positive.
be used to identify the organism even after antibiotics have begun to reduce the
infection. As the disease has a fatality risk approaching 15% within 12 hours of
infection, it is crucial to initiate testing as quickly as possible but not to wait for
the results before initiating antibiotic therapy.
General Description
DIPLOCOCCI
NONMOTILE
NONSPOREFORMING
CATALASE: POSITIVE
OXIDASE: POSITIVE
AEROBES
BASIC TESTS
FOR IDENTIFICATION
Growth on blood agar
(most strains)
Maltose
Fructose
Sucrose
-glutamylaminopeptidase
Tributyrin hydrolysis
Polysaccharide synthesis
ONPG
Reduction of NO3
ANTIBIOTIC
TREATMENT
IF SUSCEPTIBLE:
penicillin G
ampicillin
ALTERNATIVES:
ceftriaxone
cefotaxime
chloramphenicole
Enterobacter cloacae
Indole production
Methyl red
Voges-Proskauer
Citrate(Simmons)
Hydrogen sulfide(TSI)
Urea hydrolysis
Lysine decarboxylase
Arginine dihydrolase
Ornithine decarboxylase
Motility (36 C)
D-glucose acid/gas
+/+
D-mannitol fermentation
Sucrose fermentation
Lactose fermentation
D-sorbitol fermentation
Cellobiose
Esculin hydrolisis
Acetate utilization
ONPG test
ANTIBIOTIC
TREATMENT
Should be always guided by
in vitro susceptibility
tests!!
Selection of appropriate antibiotics depends on diagnosis!!
IF SUSCEPTIBLE:
Imipenem + aminoglycoside(e.g., gentamicin or amikacin)
Piperacillin/tazobactam + aminoglycoside Fluoroquinolones(e.g.,
ciprofloxacin, norfloxacin)
Trimethoprim-sulfamethoxazole (Co-trimoxazole)
Nitrofurantoin
Ceftazidime
ALTERNATIVES:
Cephalosporins III, IV
Corynebacterium diphtheriae
Corynebacterium diphtheriae can grow on media with sheep blood with or without
beta-hemolysis. Tinsdale agar (TIN) is used for the primary isolation and
identification of Corynebacterium diphtheriae. The medium differentiates
betweenC. diphtheriae and diphtheroids found in the upper respiratory tract. This
differentiation was based on the ability of C. diphtheriae to produce black (or
brown) colonies, surrounded by a brown/black halo. The dark halo is due to the
production of H2S from cystine, interacting with the tellurite salt.
Corynebacteria are Gram-positive, catalase positive, non-spore-forming, nonmotile, rod-shaped bacteria that are straight or slightly curved. Metachromatic
granules are usually present representing stored phosphate regions. Their size falls
between 2-6 micrometers in length and 0.5 micrometers in diameter. The bacteria
group together in a characteristic way, which has been described as the form of a
"V", "palisades", or "Chinese letters". They may also appear elliptical. They are
aerobic or facultatively anaerobic, chemoorganotrophs, with a 5165% genomic
G:C content. They are pleomorphic through their life cycle: they come in various
lengths and frequently have thickenings at either end, depending on the
surrounding
conditions.
Diseases
The most notable human infection is diphtheria, caused by Corynebacterium
diphtheriae. It is an acute and contagious infection characterized by
pseudomembranes of dead epithelial cells, white blood cells, red blood cells, and
fibrin that form around the tonsils and back of the throat. It is an uncommon
illness that tends to occur in unvaccinated individuals, especially school-aged
children, those in developing countries, elderly, neutropenic or
immunocompromised patients. It can occasionally infect wounds, the vulva, the
conjunctiva, and the middle ear. The virulent and toxigenic strains are lysogenic,
and produce an exotoxin formed by two polypeptide chains, which is itself
produced when a bacterium is transformed by a gene from the prophage.
cystinase activity
resistant to fosfomycin
nitrate reductase
urea
esculin
glucose
maltose
sucrose
maninitol
xylose
sugar fermentation: positive (> 90% of strains)
ANTIBIOTIC
TREATMENT
Erythromycin
Penicillin
ALTERNATIVES:
Clindamycin
Listeria monocytogenes
the fetus by penetrating the endothelial layer of the placenta. Vegetables can
become contaminated from the soil, and animals can also be carriers. Listeria
has been found in uncooked meats, uncooked vegetables, unpasteurized milk,
foods made from unpasteurized milk, and processed foods. Listeria is killed by
pasteurization and cooking. There is a chance that contamination may occur in
ready-to-eat foods such as hot dogs and deli meats because contamination may
occur after cooking and before packaging.
General Description
GRAM-POSITIVE RODS
MOTILE
NONSPOREFORMING
CATALASE: POSITIVE
OXIDASE: NEGATIVE
FACULTATIVELY
ANAEROBIC
BASIC TESTS
FOR IDENTIFICATION
Growth at 4C
Motility at 25C
Motility at 37C
-hemolysis
+*
D-glucose
VP test
Methyl red
Esculin
Urea
Gelatin
Indole
H2S
D-xylose
ANTIBIOTIC
TREATMENT
Ampicillin(or AMP + GEN)
Penicillin G (+GEN)
ALTERNATIVES
Trimethoprim-Sulfome-thoxazole(TMP-SMX)
POSSIBLE THERAPY (if susceptible)
Tetracycline
Chloamphenicol
Erythromycin
Streptococcus pyogenes
Group A streptococcus