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Key words: Anaplasma species; Dromedary (Camelus dromedarius); Molecular identification; 16S rRNA gene; Tunisia.
J Infect Dev Ctries 2015; 9(10):1117-1125. doi:10.3855/jidc.6950
(Received 01 April 2015 Accepted 28 May 2015)
Copyright 2015 Belkahia et al. This is an open-access article distributed under the Creative Commons Attribution License, which permits unrestricted use,
distribution, and reproduction in any medium, provided the original work is properly cited.
Introduction
The
genus
Anaplasma
(Rickettsiales:
Anaplasmataceae) includes Gram negative obligate
intracellular bacteria of significant importance in
veterinary and human medicine [1]. Anaplasma
marginale, the type species of Anaplasma genus, is
highly pathogenic for ruminants and poses a
considerable constraint to animal health in tropical and
subtropical regions throughout the world [2]. It causes
a variety of clinical symptoms, including fever, weight
loss, abortion, lethargy, icterus, and often death of
animals older than two years of age [2]. The closely
related species A. centrale causes mild anaplasmosis in
cattle [3,4]; for this reason, it has been used
extensively as a live vaccine for anaplasmosis control
in several countries [5]. Indeed, infection with A.
centrale induces long-lasting protective immunity in
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Table 1. Primers and/or probes used for detection and/or characterization of Anaplasma spp., A. platys-like, A.
phagocytophilum, A. marginale, A. centrale, and A. bovis in camels in the present study
Assay
Primer /
probe
Sequence 5 to 3
EE-1
TCCTGGCTCAGAACGAACGCTGGCGGC
EE-2
AGTCACTGACCCAACCTTAAATGGCTG
Target
gene
Amplicon
Reference
size (bp)
PCR 11
Anaplasma spp.
16S rRNA
1,433
Barlough et al.
(1996)
16S rRNA
641
Kawahara et al.
(2006)
16S rRNA
551
Kawahara et al.
(2006)
msp1b
95
groEL
77
PCR 22
A. phagocytophilum
SSAP2f 3 GCTGAATGTGGGGATAATTTAT
SSAP2r 3 ATGGCTGCTTCCTTTCGGTTA
A. bovis
Duplex real-time
PCR
A. marginale
AB1f 3
CTCGTAGCTTGCTATGAGAAC
AB1r 3
TCTCCCGGACTCCAGTCTG
AM-For
AM-Rev
TTGGCAAGGCAGCAGCTT
TTCCGCGAGCATGTGCAT
6FAM-TCGGTCTAACATCTCCAGGCTTTCAT6TAMRA
CTATACACGCTTGCATCTC
CGCTTTATGATGTTGATGC
VIC-ATCATCATTCTTCCCCTTTACCTCGT6TAMRA
AM-Pb4
A. centrale
AC-For
AC-Rev
AC-Pb5
Simple PCR allowing the detection of all Anaplasma species; 2 Second PCR, performed after the Simple PCR, allowing the specific species detection of A.
phagocytophilum and A. bovis; 3 Primers used in PCR reaction for the detection of A. phagocytophilum and A. bovis; 4 The quencher dye fluorophore for the
A. marginale probe was modified on 6-carboxyl-tetramethyl-rhodamine (6TAMRA) instead of Black Hole Quencher 1 (BHQ1) used by Carreli et al. [37]; 5
The reporter and quencher dye fluorophores for the A. centrale probe were modified on 4,7,2-trichloro-7-phenyl-6-carboxyfluorescein (VIC) and 6carboxyl-tetramethyl-rhodamine (6TAMRA) instead of Texas Red and Black Hole Quencher 2 (BHQ2), respectively used by Decaro et al. [38].
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Results
Tick identification and molecular survey of Anaplasma
species
Ticks collected from the camels belonged to the
genus Hyalomma (H. dromedarii, H. impeltatum, and
H. excavatum). The overall tick infestation prevalence
was 37.6% (85/226). Overall infection rate of
Anaplasma spp., estimated by EE1/EE2 PCR (Table
1), was 17.7% (minimum 14.8% in Sidi Bouzid and
maximum 31.3% in Bouficha) (Table 2). Moreover,
the infection rate of Anaplasma spp. was significantly
higher in female (24.5%) than in male camels (11.7%,
p = 0.027) (Table 2). Using qPCR tests specific for A.
marginale and A. centrale, and nPCRs for A. bovis and
A. phagocytophilum (Table 1), none of the classified
Anaplasma species analyzed in this study were
detected in any of the tested camels.
Molecular characterization of Anaplasma sp. 16S
rRNA genotypes
Nine PCR products obtained from nine randomly
selected camels (three from each sampling site) with
primers EE1/EE2 targeting 1,322 bp (88.5%) of the
16S rRNA gene of Anaplasma spp. were successfully
sequenced on both DNA strands. Based on nucleotide
alignments, the sequences were grouped in four
different genotypes (AspGDr1 to AspGDr4; GenBank
accession numbers KM401905 to KM401908). All
16S rRNA sequences obtained in this study shared
99.8% to 99.9% nucleotide similarity and differed
from each other in three nucleotide positions (Tables 3
and 4).
Table 2. Factors associated with molecular prevalence of Anaplasma spp. in camels from Tunisia
Number
Locality
Bouficha
Sidi Bouzid
Douz
Age
2 years
27 years
> 7 years
Gender
Male
Female
Tick infestation
infested
Not infested
Total
1
CI: 95% confidence interval; * Significant test.
Anaplasma spp.
Positive (% CI1)
32
155
39
10 (31.3 0.16)
23 (14.8 0.06)
7 (17.9 0.12)
44
109
73
8 (18.2 0.11)
24 (22.0 0.08)
8 (11.0 0.07)
120
106
14 (11.7 0.06)
26 (24.5 0.08)
84
142
226
14 (16.7 0.08)
26 (18.3 0.10)
40 (17.7 0.05)
P value
0.086
0.158
0.027*
0.754
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Table 3. Nucleotide diversity among 16S rRNA sequences (1,322 bp) from Anaplasma sp. related to A. platys isolated from
camels and other Anaplasma species found in GenBank
Anaplasma
sp.
Anaplasma
sp.
Host
Dromedary
Goat
A. platys
Dog
Variant
Sample1/isolate
GenBank2
Country
Reference
91
118
130
783
923
962
1211
1214
AspGDr1
Sb1-Sb3
Tunisia
KM401905
AspGDr2
Dz1-Dz3
Tunisia
KM401906
AspGDr3
Bf1; Bf2
Tunisia
KM401907
AspGDr4
Bf3
Tunisia
KM401908
J3
J3
China
JN558826
E10
E10
China
JN558821
Okinawa
Okinawa
Japan
AY077619
Present
study
Present
study
Present
study
Present
study
Liu et al.
(2012)
Liu et al.
(2012)
Inokuma
et al.
(2002)
Bf1-Bf3, Sb1-Sb3, and Dz1-Dz3 samples were collected from Bouficha, Sidi Bouzid, and Douz localities, respectively; 2 GenBank
accession number; 3 Numbers represent the nucleotide position with respect to the clone J3 from China for Anaplasma sp. related to A.
platys (GenBank accession number JN558826); Conserved nucleotide positions are indicated with asterisks. Nucleotides: T: thymine; C:
cytosine; G: guanine; A: adenine.
Table 4. Comparison of 16S rRNA sequences (1,322 bp) from Anaplasma sp. related to A. platys isolated from camels and
other Anaplasma species found in GenBank. The numbers represent the nucleotide identity rates found between the
sequences.
A. sp
A. sp
A. sp
A. sp
(AspGDr1) (AspGDr2) (AspGDr3) (AspGDr4)
A. sp
(AspGDr1)
A. sp
(AspGDr2)
A. sp
(AspGDr3)
A. sp
(AspGDr4)
A. sp
(J3)
A. sp
(E10)
A. p
A. pl
(China(Okinawa)
C-Y)
A. b
(G49)
A. m
A. o
A. c (CC)
(Lushi)
(Jingtai)
100
99.9
100
99.8
99.9
100
99.8
99.8
99.9
100
A. sp (J3)
99.7
99.8
99.8
99.8
100
A. sp (E10)
99.6
99.7
99.8
99.7
99.8
100
99.7
99.8
99.8
99.8
99.8
99.8
100
98.7
98.8
98.9
98.8
98.9
98.8
99.0
100
A. b (G49)
97.0
97.0
97.0
97.0
96.9
97.1
96.9
97.0
100
A. m (Lushi)
97.0
97.1
97.2
97.1
97.2
97.3
97.2
97.3
96.1
100
A. c (CC)
97.0
96.9
97.0
96.9
97.0
97.0
97.1
97.2
96.3
99.3
100
A. o (Jingtai)
97.0
96.9
97.0
97.0
97.0
97.0
97.1
97.1
96.1
99.2
99.5
A. pl
(Okinawa)
A. p (China-CY)
100
A. sp (AspGDr1-4): Anaplasma sp. isolated from Tunisian dromedaries (AspGDr1-4 strains, GenBank accession numbers KM401905- KM401908,
respectively); A. sp (J3, E0): Anaplasma sp. isolates found on Chinese goats (J3 and E10 isolates, GenBank accession numbers JN558826 and JN558821,
respectively); A. pl (Okinawa): A. platys isolate found on Japanese dog (Okinawa isolate, GenBank accession number AY077619); A. p (China-C-Y): A.
phagocytophilum strain isolated from Chinese sheep (China-C-Y strain, GenBank accession number GQ412338); A. b (G49): A. bovis isolate found on
Chinese goat (G49 isolate, GenBank accession number JN558824); A. m (Lushi): A. marginale isolate found on Chinese cattle (Lushi isolate, GenBank
accession number AJ633048); A. c (CC): A. centrale strain isolated from Italian cattle (CC strain, GenBank accession number EF520686); A. o (Jingtai): A.
ovis isolate found on Chinese goat (Jingtai isolate, GenBank accession number AJ633049)
1121
1122
Sequence variants from this study represented in bold and marked with
asterisks. Numbers associated with nodes represent the percentage of
1,000 bootstrap reiterations supporting the nodes (only percentages
greater than 50% were represented). The host or vector, the strain or
isolate name, the country of origin and the GenBank accession number
are indicated
Acknowledgements
This work was supported by the Laboratoire
dpidmiologie dinfections enzootiques des herbivores en
Tunisie (LR02AGR03), funded by the Ministry of Higher
Education, Scientific Research and Information and
Communication Technologies of Tunisia, and the research
project Epidmiologie de maladies bactriennes
transmission vectorielle des herbivores (06-680-0029),
which was funded by the Ministry of Agriculture of Tunisia.
The authors would like to thank Dr. Mounir Aloui, Dr.
Amen Allah Djaem, Dr. Mohamed Bayoudh, and Dr.
Bacem Hadj Mohamed for their help in blood sampling and
tick collection.
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Corresponding author
Dr. Mourad Ben Said
Laboratoire de Microbiologie
Ecole Nationale de Mdecine Vtrinaire
2020 Sidi Thabet, Tunisie
Tel: +216 71 552 200
Fax: +216 71 552 441
E-mail: bensaidmourad83@yahoo.fr
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