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Long before anyone understood the concept of bioreaction, humans were taking advantage of its
results.Bread, cheese, wine and beer were ali made possible through what was traditionally
known as fermentation a little-understood process, successful more by chance than design. It
was, in fact, the failure and frustration of French vintners who found they were too often
producing vinegar not wine, which led the famous French chemist and microbiologist Louis
Pasteur to study the fermentation process at their request.
What Pasteur discovered was that fermentation occurred as a result of the biological activity of a
microscopic plant called yeast. When unwanted microbes infiltrated the wine and "fed "on the
alcohol produced by the yeast, the microbes left behind distasteful and harmful wastes, which
ruined the wine's flavor. Pasteur's work laid the foundation for bioreactors as we know them
today, because once the process was identified and understood, it could be controlled. And it is
the control of the process that concerns chemical engineers first and foremost. The scope of
bioengineering has grown from simple wine-bottle microbiology to the industrialization of not
only beer, wine, cheese and milk production, but also the production of biotechnology's newer
products antibiotics, enzymes, steroidal hormones, vitamins, sugars and organic acids.
6.2
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biological entities. As such, bioreactor systems must be designed to provide a higher degree of
control over process upsets and contaminations, since the organisms are more sensitive and less
stable than chemicals. Biological organisms, by their nature, will mutate, which may alter the
biochemistry of the bioreaction or the physical properties of the organism. Analogous to
heterogeneous catalysis, deactivation or mortality occur and promoters or coenzymes influence
the kinetics of the bioreaction.
Although the majority of fundamental bioreactor engineering and design issues are similar,
maintaining the desired biological activity and eliminating or minimizing undesired activities
often presents a greater challenge than traditional chemical reactors typically require.
Organisms, influenced by their morphology and the bioreaction medium, are shear-sensitive to
varying degrees.
A number of bacteria, yeast and fungi cultures that can be relatively tolerant of high-shear
environments exhibit robustness in high-energy mixing vessels. Animal, fish, insect and plant
cells are delicate and usually require low-shear environments for viability. The viscosities of
bioreaction masses may change during growth and production phases, and, often, the medium
becomes non-Newtonian as a cycle progressed. Mixing within the bioreactor is integral to
efficient heat and mass transfer during the production phases, which places
additional
constraints
on
the
suitable
agitation
mechanism
bioreaction medium.
Other key differences between chemical reactors and bioreactors are selectivity and rate. In
bioreactors, higher selectivity that is, the measure of the system's capability for producing the
preferred product (over other outcomes) is of primary importance. In fact, selectivity is
especially important in the production of relatively complex molecules such as antibiotics,
steroids, vitamins, proteins and certain sugars and organic acids. Frequently, the activity and
desired selectivity occur in a substantially smaller range of conditions than are present in
conventional chemical reactors. Further, deactivation of the biomass often poses more severe
consequences than a chemical upset. Rate is of secondary importance. For many biological
systems, an incubation period is needed to prepare a culture used to inoculate the bioreactor with
the producing microbes or their precursors. Although a bioreaction can be brief, in systems
where organism or biomass growth is necessary, the bioreaction can take 10-20 d for completion
of the batch. Further, the bioreactor should not be regarded as an isolated unit, but as part of an
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integrated unit operation with both upstream (preparation) and downstream (recovery) unit
operations.
6.3
Products of Bioreactions
Bioreaction products are formed by three basic processes: 1. Processes in which the product is
produced by the cells is either extra cellular, e.g., alcohols or critic acid, or Intracellular, e.g., a
metabolite or enzyme. Production of cellular products is divided into two types, based on when
they are produced within a biological cycle. Primary metabolites are produced during growth and
are essential for continuing growth. Secondary metabolites are produced after growth has ceased.
Primary metabolites include amino acids, nucleotides, nucleic acids, proteins, lipids and
carbohydrates.
Examples of primary products for industrial use include ethanol, citric acid, acetone,
butanol, lysine, polysaccharides and vitamins.
Secondary cellular products are formed from the intermediates and products of primary
metabolism, and tend to be specific to a species or group of organisms. Not all microorganisms
produce secondary metabolites, but they are widespread among the filamentous fungi and plants.
Many secondary products have toxic or antibiotic properties and are, as such, the basis of much
of the antibiotic industry.
Production of enzymes via bioreactions has displaced inefficient extraction techniques with
mutation and genetic manipulation. Industrial
brewing,
enzymes
find
their
home
in
baking,
grain processing, dairy making, and in the production of detergents, juices, wines and
other products.
2. Processes that produce a cell mass. Bakers' yeast, used in the baking industry, is an example
of a produced cell mass. Others include single-cell proteins for food sources.
3. Processes that modify a compound that is added to the fermentation process are referred to as
biotransformation. Biotransformation occurs using the inherent enzymatic capability of most
cells. Cells of all types can be employed to biocatalyze a transformation of certain compounds
via dehydration, oxidation, hydroxyfation, amination or isomerization. Enzymatic conversions
frequently exhibit lower activation energies and higher selectivity than their chemical
counterparts. Steroids, antibiotics and prostaglandins can all be produced via biotransformation.
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sufficient substrate (usually a carbon source), such as sugars, proteins and fats
water availability
vitamins
Flow behaviors (rheology), broth viscosity and type of fluid (e.g. Newtonian,
viscoelastic, pseudoplastic, Bingham plastic).
6.5
Mixing requirements.
Sterility requirements
Types of Fermentation
Before we continue with our discussion on fermenter Design, let's review the different Types of
Fermentation.
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desired microorganisms. For example, the salt content may be high, the pH may be low, or the
water activity may be reduced by additives such as salt or sugar.
6.6
Fermentation systems
Industrial fermentations may be carried out either batch wise, as fed-batch operations, or as
continuous cultures (Fig. 1). Batch and fed-batch operations are quite common, continuous
fermentations being relatively rare. For example, continuous brewing is used commercially, but
most beer breweries use batch processes of the three systems,
1. Fed batch bioreactors are most commonly used to produce biological products.
2. Batch reactors are the second most commonly used.
3. Although continuous reactors are rarely used for large scale production of biochemicals,
they are widely used in waste treatment processes. In addition, natural ecosystems, such
as the rumen and gut, soil and rivers, are more closely represented by a continuous
culture system.
6.7
opposed
to
the
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6.8
6.9
6.9.1
Introduction
A typical bioreactor used for microbial fermentations is shown in the following figure:
Laboratory scale bioreactors with liquid volumes of less than 10 liters are constructed out of
Pyrex glass. For larger reactors, stainless steel is used.
6.9.2
Provide good mixing and thus increase mass transfer rates through the bulk liquid
and bubble boundary layers.
breaking up of bubbles.
The agitation system consists of the agitator and the baffles. The baffles are used to break
the liquid flow to increase turbulence and mixing efficiency. The role of the baffles is discussed
in depth in a later section.
The
agitator
consists
of
the
components
shown
in
the
following
diagram:
The number of impellers will depend on the height of the liquid in the reactor. Each impeller
will have between 2 and 6 blades. Most microbial fermentations use a Rushton turbine impeller.
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A single phase (ie. 240 V) drive motor can be used with small reactors. However for large
reactors, a 3 phase motor (ie 430 V) should be used. The latter will tend to require less current
and therefore generate less heat.
V TYPES OF IMPELLERS
Agitators
are
classified
as
having
radial
flow
or
axial
flow characteristics.
With radial flow mixing, the liquid flow from the impeller is initially directed towards the
wall of the reactor; ie. along the radius of the tank.
With axial flow mixing, the liquid flow from the impeller is directed downwards towards
the base of the reactor, ie. in the direction of the axis of the tank.
1. Radial flow impellers are primarily used for gas-liquid contacting (such as in the mixing
of sparged bioreactors) and blending processes. Radial flow impellers contain two or
more impeller blades which are set at a vertical pitch:
Four baffled system
The liquid flow from the blades is directed towards the walls of the reactor; ie. along the
radius of the tank. With radial flow impellers, vertical (or axial) mixing is achieved with the use
of baffles.
Radial flow mixing is not as efficient as axial flow mixing. For radial flow impellers, a
much higher input of energy input is required to generate a given level of flow as compared to
axial flow impellers.
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Radial flow impellers do and are designed to, generate high shear conditions. This is
achieved by the formation of vortices in the wake of the impeller:
The high shear is effective at breaking up bubbles. For this reason, radial flow impellers are
used for the culture of aerobic bacteria.
High shear can also damage shear sensitive materials such as crystals and precipitates and
shear sensitive cells such as filamentous fungi and animal cells.
2. Axial flow impeller blades are pitched at an angle and thus direct the liquid flow towards the
base of the tank. Examples of axial flow impellers are pitched-blade turbines, marine
impellers and hydrofoil impellers.
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The resultant flow pattern is thus predominantly vertical; i-e along the tank axis.
Axial flow mixing is considerably more energy efficient than radial flow mixing.
They are also more effective at lifting solids from the base of the tank. Axial flow impellers have
low shear properties. The angled pitch of the agitators coupled with the thin trailing edges of the
impeller blades reduce formation of eddies in the wake of the moving blades.
Axial flow impellers are used for mixing shear sensitive processes such as crystallization
and precipitation reactions. They are also used widely in the culture of animal cells.
Their low shear characteristics generally make them ineffective at breaking up bubbles and
thus unsuitable for use in aeration of bacterial fermentations.
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temperature probes
Typically the heat transfer system will use a "jacket" to transfer heat in or out of the reactor.
The jacket is a shell which surrounds part of the reactor. The liquid in the jacket does not come
in direct contact with the fermentation fluid.
The jacket will typically be "dimpled" to encourage turbulence in the jacket and thus
increase the heat transfer efficiency. An alternative to using jackets are coils. Coils have a much
higher heat transfer efficiency than jackets. However coils take up valuable reactor volume and
can be difficult to clean and sterilize. The heating/cooling requirements are provided by the
following methods In pilot and production scale reactors, heating is typically only required
during the initial stages and final stages of the fermentation as most processes which occur
during a fermentation process, including
chemical reactions
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a compressor
an air sparger
Excessive foam formation can lead to blocked air exit filters and to pressure build up in the
reactor. The latter can lead to a loss of medium, damage to the reactor and even injury to
operating personnel.
Foam is typically controlled with aid of antifoaming agents based on silicone or on
vegetable oils. As discussed previously, excessive antifoam addition can however result in poor
oxygen transfer rates.
The following factors affect the foam formation and the requirement to antifoam addition.
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Mechanical foam breakers can eliminate or at least reduce the antifoam requirement. These
devices generate sit above the liquid and generate high shear forces which break the bubbles in
the foam. High shear agitators and nozzles connected to high shear pumps are often used.
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For small scale reactor systems such as those used in the culture of animal cells, ultrasonic
foam breakers are sometimes used. These generate high frequency vibrations which break the
bubbles in the foam.
A bioreactor is divided in a working volume and a head-space volume. The working volume
is the fraction of the total volume taken up by the medium, microbes, and gas bubbles.
The remaining volume is called the headspace.
Typically, the working volume will be 70-80% of the total fermenter volume.
This value will however depend on the rate of foam formation during the reactor. If the
medium or the fermentation has a tendency to foam, then a larger headspace and smaller
working volume will need to be used.
The headspace plays an important role in foam control. In systems which readily foam, the
working volume must be reduced to facilitate better foam control.
The larger headspace volume, then the greater the tendency for the foam to collapse under
its own weight. For example, for fermentations in which high foam formation can be rapid, a
50% headspace volume may be required.
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pH Control System
The pH control system consists of
a pH probe
The pH probe is typically steam sterilizable. The neutralizing agents used to control pH
should be non-corrosive. They should also be non-toxic to cells when diluted in the medium.
Potassium hydroxide is preferred to NaOH, as potassium ions tend to be less toxic to cells than
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sodium ions. However KOH is more expensive than NaOH. Sodium carbonate is also commonly
used in small scale bioreactor systems.
Hydrochloric acid should never be used as it is corrosive to most stainless steel.
Likewise sulphuric acid concentrations should not be between 10% and 80% as between this
range, sulphuric acid is most corrosive. For fermentations that produce large amounts of acids,
for example lactic acid, high concentrations of alkali (4 M and above) are used. This prevents
dilution of the medium due to the addition of excessive addition of the alkali solution.
For laboratory fermenters, a peristaltic pump is used to add the pH adjusting agents.
Silicone tubing is often used. However, note that silicone tubing will decay in the presence of
high alkali concentrations. Thick walled slicone tubing should be used.
Alternatively Tygon or Neoprene tubing can be used. Tygon is not autoclavable but can be
sterilized by passing the NaOH through the tubing for about 1 hour. Neoprene is autoclavable
but is not transparent or translucent as is Tygon and silicone.
Flow Descriptio
INTRODUCTION
Fluid mixing is described as existing one of three states:
Laminar flow
Turbulent flow
Transient flow.
In laminar flow, the fluid tends to flow in one direction as visualized as "flow lines". There
is little mixing between these flow lines.
In turbulent flow, the flow lines breakdown to form eddies. These eddies carry the fluids
away from the flow lines leading to mixing of materials through the reactor.
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Laminar Row
Turbulent flow
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In an unbaffled tank, as the stirrer speed is increased, the liquid will continue to circulate,
although at a faster speed. Eventually the liquid and air will be drawn into impeller leading to a
phenomenon known as vortexing.
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the formation of a whirlpool in the reactor. This whirlpool grows larger as the stirrer speed
increases.
OFF CENTRE IMPELLERS
The simplest method to avoid vortexing is to move the impeller into an off-centre
position or side entry position or by tilting the impeller at an angle.
Off-centre and side-entry impellers are suited oniy for stirred tanks with small liquid
volumes (less than 10,000 litres).
With off-centre impellers, the forces acting on the impeller are unevenly distributed. This can
lead to shaft, impeller and motor damage.
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BAFFLES
The alternative to off-center impellers are baffles.
Baffles break the liquid flow a line causing the formation of turbulent eddies.
The stirring speeds required for turbulence in a baffled reactor is many magnitudes less
than that required for an unbaffled fermenter.
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a sparger and
dimensions:
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